Density Functional Theory Based Embedding for Molecular and Periodic Systems

Density Functional Theory Based Embedding for Molecular and Periodic Systems
Author: Manas Sharma
Publisher:
Total Pages: 0
Release: 2024*
Genre:
ISBN:

Complex chemical systems pose formidable challenges to electronic structure theory. While density functional theory (DFT), a popular lower-level quantum mechanical method, can efficiently handle large systems with hundreds of atoms, it is plagued by issues such as self-interaction error and the use of approximate exchange-correlation functionals. On the other hand, correlated wavefunction theory (WFT) methods like coupled cluster (CC) theories, are much more accurate but prohibitively expensive for systems with more than $ sim50$ atoms. Therefore, balancing accuracy against computational cost is crucial when selecting an electronic structure method. Usually, the relevant and interesting chemical phenomenon tends to be localized to a small active region of the complete system, such as the adsorption site of the molecule, or the vicinity of the defect. This is where embedding techniques come into the picture. Embedding methods offer a promising compromise to bridge the accuracy versus cost gap, by allowing to split the larger system into an active and environment subsystem. The active subsystem, which is the region of interest, can then be treated using a more accurate and computationally demanding method while the environment can be treated using a lower-level theory like DFT and the influence of the environment on the active subsystem is accounted for by the chosen embedding formalism. This thesis presents a practical and efficient implementation of density functional theory (DFT) based embedding, wherein the environment is treated at the DFT level, and its influence on the active subsystem is accounted for via an embedding potential which is a functional of the subsystem densities. The implementation supports both periodic and aperiodic systems, with the essence being the expansion of orbitals and electron density using Gaussian basis functions, rather than plane waves.

Fragmentation: Toward Accurate Calculations on Complex Molecular Systems

Fragmentation: Toward Accurate Calculations on Complex Molecular Systems
Author: Mark S. Gordon
Publisher: John Wiley & Sons
Total Pages: 376
Release: 2017-10-23
Genre: Science
ISBN: 1119129249

Fragmentation: Toward Accurate Calculations on Complex Molecular Systems introduces the reader to the broad array of fragmentation and embedding methods that are currently available or under development to facilitate accurate calculations on large, complex systems such as proteins, polymers, liquids and nanoparticles. These methods work by subdividing a system into subunits, called fragments or subsystems or domains. Calculations are performed on each fragment and then the results are combined to predict properties for the whole system. Topics covered include: Fragmentation methods Embedding methods Explicitly correlated local electron correlation methods Fragment molecular orbital method Methods for treating large molecules This book is aimed at academic researchers who are interested in computational chemistry, computational biology, computational materials science and related fields, as well as graduate students in these fields.

Recent Advances in Density Functional Methods

Recent Advances in Density Functional Methods
Author: Delano Pun Chong
Publisher: World Scientific
Total Pages: 432
Release: 1995
Genre: Technology & Engineering
ISBN: 9810248253

In the last few years, much attention has been given by theoretical chemists to the development of more accurate model functionals and faster computational techniques including excited electronic states. The 8th International Conference on the Applications of Density Functional Theory to Chemistry and Physics, held in Rome, Italy, on 6-10 September 1999, gathered chemists and physicists to present and discuss state-of-the-art methodological developments and applications of density functional theory (DFT) to increasingly complex systems. The scientists shared their knowledge and experience in DFT, enabling them to face the challenges posed by the needs of high level modeling and simulation in their disciplines. The meeting was opened with an exciting lecture delivered by Nobel laureate W Kohn. The growing use of DFT in studying organic, inorganic and organometallic molecules, clusters and solids provided the basis for the success of the conference, whose main contributions are collected in this invaluable book.

Theoretical prediction of properties of atomistic systems

Theoretical prediction of properties of atomistic systems
Author: Alexander Lindmaa
Publisher: Linköping University Electronic Press
Total Pages: 82
Release: 2017-08-15
Genre:
ISBN: 9176854868

The prediction of ground state properties of atomistic systems is of vital importance in technological advances as well as in the physical sciences. Fundamentally, these predictions are based on a quantum-mechanical description of many-electron systems. One of the hitherto most prominent theories for the treatment of such systems is density functional theory (DFT). The main reason for its success is due to its balance of acceptable accuracy with computational efficiency. By now, DFT is applied routinely to compute the properties of atomic, molecular, and solid state systems. The general approach to solve the DFT equations is to use a density-functional approximation (DFA). In Kohn-Sham (KS) DFT, DFAs are applied to the unknown exchangecorrelation (xc) energy. In orbital-free DFT on the other hand, where the total energy is minimized directly with respect to the electron density, a DFA applied to the noninteracting kinetic energy is also required. Unfortunately, central DFAs in DFT fail to qualitatively capture many important aspects of electronic systems. Two prime examples are the description of localized electrons, and the description of systems where electronic edges are present. In this thesis, I use a model system approach to construct a DFA for the electron localization function (ELF). The very same approach is also taken to study the non-interacting kinetic energy density (KED) in the slowly varying limit of inhomogeneous electron densities, where the effect of electronic edges are effectively included. Apart from the work on model systems, extensions of an exchange energy functional with an improved KS orbital description are presented: a scheme for improving its description of energetics of solids, and a comparison of its description of an essential exact exchange feature known as the derivative discontinuity with numerical data for exact exchange. An emerging alternative route towards the prediction of the properties of atomistic systems is machine learning (ML). I present a number of ML methods for the prediction of solid formation energies, with an accuracy that is on par with KS DFT calculations, and with orders-of-magnitude lower computational cost. Att kunna förutsäga egenskaper hos atomistiska system utgör en viktigdel av vår teknologiska utveckling, samt spelar en betydande roll i defysikaliska vetenskaperna. Sådana förutsägelser bygger på en kvantmekaniskbeskrivning av mångelektronsystem. En av de mest framståendeteorierna för att behandla den här typen av system är täthetsfunktionalteorin(DFT). Den främsta orsaken till dess framgång är attden lyckas kombinera skaplig noggrannhet med en bra beräkningseffektivitet.DFT används numera rutinmässigt för att beräkna storheterhos atomer, molekyler, och fasta kroppar. Generellt sett löses ekvationerna inom DFT genom att man inför entäthetsfunktionalapproximation (DFA). I Kohn-Sham (KS) DFT, användsDFAer för att approximera utbytes-korrelationsenergin. Inom orbitalfriDFT, där målet är att direkt minimera den totala energin med avseendepå elektrontätheten, så approximerar man också den icke-interageranderörelseenergin hos elektronerna. Dessvärre så fallerar många centralaDFAer att kvalitativt beskriva många viktiga aspekter hos elektronsystem.Två viktiga exempel är beskrivningen av lokaliserade elektroner,samt beskrivningen av system där det förekommer elektronytor. I denna avhandling använder jag modellsystem för att konstruera enDFAför elektronlokaliseringsfunktionen (ELF). Samma tillvägagångssättappliceras sedan för att studera den kinetiska energitätheten i gränsen avlångsamt varierande elektrontätheter, där effekten av elektronytor effektivtinkluderas. Förutom arbetet som berör modellsystem, så presenterasen utökad variant av en utbytes-energifunktional med en förbättrad KSorbitalbeskrivning: ett schema för att förbättra dess energiegenskaperför solida material, samt en jämförelse av dess beskrivning av en viktigegenskap hos den exakta utbytesenergin, vilket utgörs av diskontinuiteteri dess derivata. Ett mera nyligen uppkommet samt alternativt sätt att kunna förutsägaegenskaper hos atomistiska system utgörs av maskinlärning (ML).Jag presenterar ett antal ML-modeller för att kunna förutsäga formeringsenergierhos fasta material med en noggrannhet som är i linje medresultat som uppnås av beräkningar med hjälp av KS DFT, och med enberäkningseffektivitet som är flera storleksordningar snabbare.

Density Functional Theory

Density Functional Theory
Author: Daniel Glossman-Mitnik
Publisher: BoD – Books on Demand
Total Pages: 332
Release: 2022-05-18
Genre: Science
ISBN: 1839698454

Density Functional Theory (DFT) is a powerful technique for calculating and comprehending the molecular and electrical structure of atoms, molecules, clusters, and solids. Its use is based not only on the capacity to calculate the molecular characteristics of the species of interest but also on the provision of interesting concepts that aid in a better understanding of the chemical reactivity of the systems under study. This book presents examples of recent advances, new perspectives, and applications of DFT for the understanding of chemical reactivity through descriptors forming the basis of Conceptual DFT as well as the application of the theory and its related computational procedures in the determination of the molecular properties of different systems of academic, social, and industrial interest.

Density Functional Theory

Density Functional Theory
Author: David S. Sholl
Publisher: John Wiley & Sons
Total Pages: 228
Release: 2023-02-07
Genre: Science
ISBN: 1119840864

Density Functional Theory A concise and rigorous introduction to the applications of DFT calculations In the newly revised second edition of Density Functional Theory: A Practical Introduction, the authors deliver a concise and easy-to-follow introduction to the key concepts and practical applications of density functional theory (DFT) with an emphasis on plane-wave DFT. The authors draw on decades of experience in the field, offering students from a variety of backgrounds a balanced approach between accessibility and rigor, creating a text that is highly digestible in its entirety. This new edition: Discusses in more detail the accuracy of DFT calculations and the choice of functionals Adds an overview of the wide range of available DFT codes Contains more examples on the use of DFT for high throughput materials calculations Puts more emphasis on computing phase diagrams and on open ensemble methods widely used in electrochemistry Is significantly extended to cover calculation beyond standard DFT, e.g., dispersion-corrected DFT, DFT+U, time-dependent DFT Perfect for graduate students and postdoctoral candidates in physics and engineering, Density Functional Theory: A Practical Introduction will also earn a place in the libraries of researchers and practitioners in chemistry, materials science, and mechanical engineering.

Density Functional Theory

Density Functional Theory
Author: Daniel Glossman-Mitnik
Publisher: BoD – Books on Demand
Total Pages: 168
Release: 2019-01-30
Genre: Science
ISBN: 178985167X

Density Functional Theory (or DFT for short) is a potent methodology useful for calculating and understanding the molecular and electronic structure of atoms, molecules, clusters, and solids. Its use relies not only in the ability to calculate the molecular properties of the species of interest but also provides interesting concepts that allow a better comprehension of the chemical reactivity of the studied systems. This book represents an attempt to present examples on the utility of DFT for the understanding of the chemical reactivity through descriptors that constitute the basis of the so called Conceptual DFT (sometimes also named as Chemical Reactivity Theory) as well as the application of the theory and its related computational procedures in the determination of the molecular properties of different systems of academic and industrial interest.

Recent Developments and Applications of Modern Density Functional Theory

Recent Developments and Applications of Modern Density Functional Theory
Author: Jorge M. Seminario
Publisher: Elsevier
Total Pages: 863
Release: 1996-11-18
Genre: Science
ISBN: 0080540392

The present status of Density Functional Theory (DFT), which has evolved as the main technique for the study of matter at the atomistic level, is described in this volume. Knowing the behavior of atoms and molecules provides a sure avenue for the design of new materials with specific features and properties in many areas of science and technology. A technique based on purely first principles allowing large savings in time and money greatly benefits the specialist or designer of new materials. The range of areas where DFT is applied has expanded and continues to do so. Any area where a molecular system is the center of attention can be studied using DFT.The scope of the 22 chapters in this book amply testifies to this.

Density Functional Theory of Molecules, Clusters, and Solids

Density Functional Theory of Molecules, Clusters, and Solids
Author: D.E. Ellis
Publisher: Springer Science & Business Media
Total Pages: 321
Release: 2012-12-06
Genre: Science
ISBN: 9401104875

Rapid advances are taking place in the application of density functional theory (DFT) to describe complex electronic structures, to accurately treat large systems and to predict physical and chemical properties. Both theoretical content and computational methodology are developing at a pace which offers researchers new opportunities in areas such as quantum chemistry, cluster science, and solid state physics. This volume contains ten contributions by leading scientists in the field and provides an authoritative overview of the most important developments. The book focuses on the following themes: determining adequate approximations for the many-body problem of electronic correlations; how to transform these approximations into computational algorithms; applications to discover and predict properties of electronic systems; and developing the theory. For researchers in surface chemistry, catalysis, ceramics and inorganic chemistry.