Evolutionary Systems Biology

Evolutionary Systems Biology
Author: Orkun S. Soyer
Publisher: Springer Science & Business Media
Total Pages: 459
Release: 2012-07-23
Genre: Science
ISBN: 1461435676

The book aims to introduce the reader to the emerging field of Evolutionary Systems Biology, which approaches classical systems biology questions within an evolutionary framework. An evolutionary approach might allow understanding the significance of observed diversity, uncover “evolutionary design principles” and extend predictions made in model organisms to others. In addition, evolutionary systems biology can generate new insights into the adaptive landscape by combining molecular systems biology models and evolutionary simulations. This insight can enable the development of more detailed mechanistic evolutionary hypotheses.

Evolutionary Systems Biology

Evolutionary Systems Biology
Author: Anton Crombach
Publisher: Springer Nature
Total Pages: 299
Release: 2021-08-05
Genre: Science
ISBN: 3030717372

This new edition captures the advances made in the field of evolutionary systems biology since the publication of the first edition. The first edition focused on laying the foundations of evolutionary systems biology as an interdisciplinary field, where a way of thinking and asking questions is combined with a wide variety of tools, both experimental and theoretical/computational. Since publication of the first edition, evolutionary systems biology is now a well-known term describing this growing field. The new edition provides an overview of the current status and future developments of this interdisciplinary field. Chapters highlight several key achievements from the last decade and outline exciting new developments, including an understanding of the interplay between complexity and predictability in evolutionary systems, new viewpoints and methods to study organisms in evolving populations at the level of the genome, gene regulatory network, and metabolic network, and better analysis and modeling techniques that will open new avenues of scientific inquiry.

Evolutionary Genomics and Systems Biology

Evolutionary Genomics and Systems Biology
Author: Gustavo Caetano-Anollés
Publisher: Wiley-Blackwell
Total Pages: 330
Release: 2010-07-08
Genre: Science
ISBN: 0470570407

A comprehensive, authoritative look at an emergent area in post-genomic science, Evolutionary genomics is an up-and-coming, complex field that attempts to explain the biocomplexity of the living world. Evolutionary Genomics and Systems Biology is the first full-length book to blend established and emerging concepts in bioinformatics, evolution, genomics, and structural biology, with the integrative views of network and systems biology. Three key aspects of evolutionary genomics and systems biology are covered in clear detail: the study of genomic history, i.e., understanding organismal evolution at the genomic level; the study of macromolecular complements, which encompasses the evolution of the protein and RNA machinery that propels life; and the evolutionary and dynamic study of wiring diagrams—macromolecular components in interaction—in the context of genomic complements. The book also features: A solid, comprehensive treatment of phylogenomics, the evolution of genomes, and the evolution of biological networks, within the framework of systems biology A special section on RNA biology—translation, evolution of structure, and micro RNA and regulation of gene expression Chapters on the mapping of genotypes to phenotypes, the role of information in biology, protein architecture and biological function, chromosomal rearrangements, and biological networks and disease Contributions by leading authorities on each topic Evolutionary Genomics and Systems Biology is an ideal book for students and professionals in genomics, bioinformatics, evolution, structural biology, complexity, origins of life, systematic biology, and organismal diversity, as well as those individuals interested in aspects of biological sciences as they interface with chemistry, physics, and computer science and engineering.

Encyclopedia of Evolutionary Biology

Encyclopedia of Evolutionary Biology
Author:
Publisher: Academic Press
Total Pages: 2138
Release: 2016-04-14
Genre: Science
ISBN: 0128004266

Encyclopedia of Evolutionary Biology, Four Volume Set is the definitive go-to reference in the field of evolutionary biology. It provides a fully comprehensive review of the field in an easy to search structure. Under the collective leadership of fifteen distinguished section editors, it is comprised of articles written by leading experts in the field, providing a full review of the current status of each topic. The articles are up-to-date and fully illustrated with in-text references that allow readers to easily access primary literature. While all entries are authoritative and valuable to those with advanced understanding of evolutionary biology, they are also intended to be accessible to both advanced undergraduate and graduate students. Broad topics include the history of evolutionary biology, population genetics, quantitative genetics; speciation, life history evolution, evolution of sex and mating systems, evolutionary biogeography, evolutionary developmental biology, molecular and genome evolution, coevolution, phylogenetic methods, microbial evolution, diversification of plants and fungi, diversification of animals, and applied evolution. Presents fully comprehensive content, allowing easy access to fundamental information and links to primary research Contains concise articles by leading experts in the field that ensures current coverage of each topic Provides ancillary learning tools like tables, illustrations, and multimedia features to assist with the comprehension process

The Character Concept in Evolutionary Biology

The Character Concept in Evolutionary Biology
Author: Günter P. Wagner
Publisher: Elsevier
Total Pages: 647
Release: 2000-10-31
Genre: Science
ISBN: 0080528902

Almost all evolutionary biologists, indeed all biologists, use particular features to study life. These characteristics or features used by evolutionary biologists are used in a particular way to unravel a tangled evolutionary history, document the rate of evolutionary change, or as evidence of biodiversity. "Characters" are the "data" of evolutionary biology and they can be employed differently in research providing both opportunities and limitations. The Character Concept in Evolutionary Biology is about characters, their use, how different sorts of characters are limited, and what are appropriate methods for character analysis. Leading evolutionary biologists from around the world are contributors to this authoritative review of the "character concept." Because characters and the conception of characters are central to all studies of evolution, and because evolution is the central organizing principle of biology, this book will appeal to a wide cross-section of biologists. - Focuses upon "characters" -- fundamental data for evolutionary biology - Covers the myriad ways in which characters are defined, described, and distinguished - Includes historical, morphological, molecular, behavioral, and philosophical perspectives

Biology's First Law

Biology's First Law
Author: Daniel W. McShea
Publisher: University of Chicago Press
Total Pages: 186
Release: 2010-07-15
Genre: Science
ISBN: 0226562271

Life on earth is characterized by three striking phenomena that demand explanation: adaptation—the marvelous fit between organism and environment; diversity—the great variety of organisms; and complexity—the enormous intricacy of their internal structure. Natural selection explains adaptation. But what explains diversity and complexity? Daniel W. McShea and Robert N. Brandon argue that there exists in evolution a spontaneous tendency toward increased diversity and complexity, one that acts whether natural selection is present or not. They call this tendency a biological law—the Zero-Force Evolutionary Law, or ZFEL. This law unifies the principles and data of biology under a single framework and invites a reconceptualization of the field of the same sort that Newton’s First Law brought to physics. Biology’s First Law shows how the ZFEL can be applied to the study of diversity and complexity and examines its wider implications for biology. Intended for evolutionary biologists, paleontologists, and other scientists studying complex systems, and written in a concise and engaging format that speaks to students and interdisciplinary practitioners alike, this book will also find an appreciative audience in the philosophy of science.

Inheritance Systems and the Extended Evolutionary Synthesis

Inheritance Systems and the Extended Evolutionary Synthesis
Author: Eva Jablonka
Publisher: Cambridge University Press
Total Pages: 90
Release: 2020-06-04
Genre: Science
ISBN: 1108607381

Current knowledge of the genetic, epigenetic, behavioural and symbolic systems of inheritance requires a revision and extension of the mid-twentieth-century, gene-based, 'Modern Synthesis' version of Darwinian evolutionary theory. We present the case for this by first outlining the history that led to the neo-Darwinian view of evolution. In the second section we describe and compare different types of inheritance, and in the third discuss the implications of a broad view of heredity for various aspects of evolutionary theory. We end with an examination of the philosophical and conceptual ramifications of evolutionary thinking that incorporates multiple inheritance systems.

Foundations of Complex-system Theories

Foundations of Complex-system Theories
Author: Sunny Y. Auyang
Publisher: Cambridge University Press
Total Pages: 422
Release: 1998
Genre: Business & Economics
ISBN: 9780521778268

Analyzes approaches to the study of complexity in the physical, biological, and social sciences.

Systems Evolutionary Biology

Systems Evolutionary Biology
Author: Bor-Sen Chen
Publisher: Academic Press
Total Pages: 392
Release: 2018-02-03
Genre: Medical
ISBN: 0128140739

Systems Evolutionary Biology: Biological Network Evolution Theory, Stochastic Evolutionary Game Strategies, and Applications to Systems Synthetic Biology discusses the evolutionary game theory and strategies of nonlinear stochastic biological networks under random genetic variations and environmental disturbances and their application to systematic synthetic biology design. The book provides more realistic stochastic biological system models to mimic the real biological systems in evolutionary process and then introduces network evolvability, stochastic evolutionary game theory and strategy based on nonlinear stochastic networks in evolution. Readers will find remarkable, revolutionary information on genetic evolutionary biology that be applied to economics, engineering and bioscience. - Explains network fitness, network evolvability and network robustness of biological networks from the systematic perspective - Discusses the evolutionary noncooperative and cooperative game strategies of biological networks - Offers detailed diagrams to help readers understand biological networks, their systematic behaviors and the simulational results of evolutionary biological networks - Includes examples in every chapter with computational simulation to illustrate the solution procedure of evolutionary theory, strategy and results

Cycles of Contingency

Cycles of Contingency
Author: Susan Oyama
Publisher: MIT Press
Total Pages: 398
Release: 2003-01-24
Genre: Science
ISBN: 9780262650632

The nature/nurture debate is not dead. Dichotomous views of development still underlie many fundamental debates in the biological and social sciences. Developmental systems theory (DST) offers a new conceptual framework with which to resolve such debates. DST views ontogeny as contingent cycles of interaction among a varied set of developmental resources, no one of which controls the process. These factors include DNA, cellular and organismic structure, and social and ecological interactions. DST has excited interest from a wide range of researchers, from molecular biologists to anthropologists, because of its ability to integrate evolutionary theory and other disciplines without falling into traditional oppositions.The book provides historical background to DST, recent theoretical findings on the mechanisms of heredity, applications of the DST framework to behavioral development, implications of DST for the philosophy of biology, and critical reactions to DST.