String Algorithms in C

String Algorithms in C
Author: Thomas Mailund
Publisher: Apress
Total Pages:
Release: 2020-11-12
Genre: Computers
ISBN: 9781484259191

Implement practical data structures and algorithms for text search and discover how it is used inside other larger applications. This unique in-depth guide explains string algorithms using the C programming language. String Algorithms in C teaches you the following algorithms and how to use them: classical exact search algorithms; tries and compact tries; suffix trees and arrays; approximative pattern searches; and more. In this book, author Thomas Mailund provides a library with all the algorithms and applicable source code that you can use in your own programs. There are implementations of all the algorithms presented in this book so there are plenty of examples. You’ll understand that string algorithms are used in various applications such as image processing, computer vision, text analytics processing from data science to web applications, information retrieval from databases, network security, and much more. What You Will Learn Use classical exact search algorithms including naive search, borders/border search, Knuth-Morris-Pratt, and Boyer-Moor with or without Horspool Search in trees, use tries and compact tries, and work with the Aho-Carasick algorithm Process suffix trees including the use and development of McCreight’s algorithm Work with suffix arrays including binary searches; sorting naive constructions; suffix tree construction; skew algorithms; and the Borrows-Wheeler transform (BWT) Deal with enhanced suffix arrays including longest common prefix (LCP) Carry out approximative pattern searches among suffix trees and approximative BWT searches Who This Book Is For Those with at least some prior programming experience with C or Assembly and have at least prior experience with programming algorithms.

Algorithms on Strings

Algorithms on Strings
Author: Maxime Crochemore
Publisher: Cambridge University Press
Total Pages: 392
Release: 2007-04-09
Genre: Computers
ISBN: 1139463853

The book is intended for lectures on string processes and pattern matching in Master's courses of computer science and software engineering curricula. The details of algorithms are given with correctness proofs and complexity analysis, which make them ready to implement. Algorithms are described in a C-like language. The book is also a reference for students in computational linguistics or computational biology. It presents examples of questions related to the automatic processing of natural language, to the analysis of molecular sequences, and to the management of textual databases.

Algorithms on Strings, Trees, and Sequences

Algorithms on Strings, Trees, and Sequences
Author: Dan Gusfield
Publisher: Cambridge University Press
Total Pages: 556
Release: 1997-05-28
Genre: Computers
ISBN: 1139811002

String algorithms are a traditional area of study in computer science. In recent years their importance has grown dramatically with the huge increase of electronically stored text and of molecular sequence data (DNA or protein sequences) produced by various genome projects. This book is a general text on computer algorithms for string processing. In addition to pure computer science, the book contains extensive discussions on biological problems that are cast as string problems, and on methods developed to solve them. It emphasises the fundamental ideas and techniques central to today's applications. New approaches to this complex material simplify methods that up to now have been for the specialist alone. With over 400 exercises to reinforce the material and develop additional topics, the book is suitable as a text for graduate or advanced undergraduate students in computer science, computational biology, or bio-informatics. Its discussion of current algorithms and techniques also makes it a reference for professionals.

Algorithms on Strings, Trees, and Sequences

Algorithms on Strings, Trees, and Sequences
Author: Dan Gusfield
Publisher: Cambridge University Press
Total Pages: 556
Release: 1997-05-28
Genre: Computers
ISBN: 0521585198

This book describes a range of string problems in computer science and molecular biology and the algorithms developed to solve them.

Handbook of Exact String Matching Algorithms

Handbook of Exact String Matching Algorithms
Author: Christian Charras
Publisher: College PressPub Company
Total Pages: 238
Release: 2004
Genre: Computers
ISBN: 9780954300647

String matching is a very important subject in the wider domain of text processing. It consists of finding one, or more generally, all the occurrences of a string (more generally called a pattern) in a text. The Handbook of Exact String Matching Algorithms presents 38 methods for solving this problem. For each, it gives the main features, a description, its C code, an example and references.

Optimized C++

Optimized C++
Author: Kurt Guntheroth
Publisher: "O'Reilly Media, Inc."
Total Pages: 387
Release: 2016-04-27
Genre: Computers
ISBN: 1491922036

In today’s fast and competitive world, a program’s performance is just as important to customers as the features it provides. This practical guide teaches developers performance-tuning principles that enable optimization in C++. You’ll learn how to make code that already embodies best practices of C++ design run faster and consume fewer resources on any computer—whether it’s a watch, phone, workstation, supercomputer, or globe-spanning network of servers. Author Kurt Guntheroth provides several running examples that demonstrate how to apply these principles incrementally to improve existing code so it meets customer requirements for responsiveness and throughput. The advice in this book will prove itself the first time you hear a colleague exclaim, “Wow, that was fast. Who fixed something?” Locate performance hot spots using the profiler and software timers Learn to perform repeatable experiments to measure performance of code changes Optimize use of dynamically allocated variables Improve performance of hot loops and functions Speed up string handling functions Recognize efficient algorithms and optimization patterns Learn the strengths—and weaknesses—of C++ container classes View searching and sorting through an optimizer’s eye Make efficient use of C++ streaming I/O functions Use C++ thread-based concurrency features effectively

Text Algorithms

Text Algorithms
Author: Maxime Crochemore
Publisher: Maxime Crochemore
Total Pages: 396
Release: 1994
Genre: Algorithms
ISBN: 0195086090

This much-needed book on the design of algorithms and data structures for text processing emphasizes both theoretical foundations and practical applications. It is intended to serve both as a textbook for courses on algorithm design, especially those related to text processing, and as a reference for computer science professionals. The work takes a unique approach, one that goes more deeply into its topic than other more general books. It contains both classical algorithms and recent results of research on the subject. The book is the first text to contain a collection of a wide range of text algorithms, many of them quite new and appearing here for the first time. Other algorithms, while known by reputation, have never been published in the journal literature. Two such important algorithms are those of Karp, Miller and Rosenberg, and that of Weiner. Here they are presented together for the fist time. The core of the book is the material on suffix trees and subword graphs, applications of these data structures, new approaches to time-space optimal string-matching, and text compression. Also covered are basic parallel algorithms for text problems. Applications of all these algorithms are given for problems involving data retrieval systems, treatment of natural languages, investigation of genomes, data compression software, and text processing tools. From the theoretical point of view. the book is a goldmine of paradigms for the development of efficient algorithms, providing the necessary foundation to creating practical software dealing with sequences. A crucial point in the authors' approach is the development of a methodology for presenting text algorithms so they can be fully understood. Throughout, the book emphasizes the efficiency of algorithms, holding that the essence of their usefulness depends on it. This is especially important since the algorithms described here will find application in "Big Science" areas like molecular sequence analysis where the explosive growth of data has caused problems for the current generation of software. Finally, with its development of theoretical background, the book can be considered as a mathematical foundation for the analysis and production of text processing algorithms.

C++ Cookbook

C++ Cookbook
Author: D. Ryan Stephens
Publisher: "O'Reilly Media, Inc."
Total Pages: 592
Release: 2006
Genre: Computers
ISBN: 0596007612

"Solutions and examples for C++ programmers"--Cover.

String Searching Algorithms

String Searching Algorithms
Author: Graham A Stephen
Publisher: World Scientific
Total Pages: 257
Release: 1994-10-17
Genre: Computers
ISBN: 9814501867

String searching is a subject of both theoretical and practical interest in computer science. This book presents a bibliographic overview of the field and an anthology of detailed descriptions of the principal algorithms available. The aim is twofold: on the one hand, to provide an easy-to-read comparison of the available techniques in each area, and on the other, to furnish the reader with a reference to in-depth descriptions of the major algorithms. Topics covered include methods for finding exact and approximate string matches, calculating ‘edit’ distances between strings, finding common sequences and finding the longest repetitions within strings. For clarity, all the algorithms are presented in a uniform format and notation.

Flexible Pattern Matching in Strings

Flexible Pattern Matching in Strings
Author: Gonzalo Navarro
Publisher: Cambridge University Press
Total Pages: 236
Release: 2002-05-27
Genre: Computers
ISBN: 9780521813075

Presents recently developed algorithms for searching for simple, multiple and extended strings, regular expressions, exact and approximate matches.