In the bottom up approach of today's nanoscience, the supramolecular assembly of metal atoms and molecules on surfaces is leading to functional compounds, relevant to many applications in optoelectronics, magnetism, and catalysis. It has been found that in some cases high magnetic spin states and strong magnetic anisotropy appear as a result of electron transfer between ligands, surface and metal atom. The focus of this thesis lies on the self assembling of 1,2,4,5-Tetracyanobenzene (TCNB) and Fe-TCNB coordination nanostructures on the Au(111) surface. The structural formation is directed by the non covalent interactions. Scanning tunneling spectroscopy (STS) reveal that the TCNB molecules are physisorbed on Au(111) surface. By detail analysis of the dI/dV spectra above the TCNB monolayer on the Au(111) surface, we found that the TCNB molecules on Au(111) shows a negligible charge transfer with Au(111) substrate and a small adsorption energy of 0.5 eV per TCNB molecules. STS measurement provide a HOMO-LUMO gap of 3 eV in agreement with DFT calculations. By controlling the fabrication parameters, surface coordination nanostructures with different chemical composition or molecular packing have been synthesized. The electronic properties have been characterized by the local dI/dV analysis of the metal centers at different steps of a Fe-(TCNB)x (x=4, 2) complexes formation. At low temperature deposition, first form an ordered metastable intermediate. STM data yield the bond angle between the Fe-N-C is 120°. The scanning tunneling spectroscopy reveal that Fe atoms and the TCNB molecules keep their identity while the Fe atoms localize the surface-state electrons similar to what they do on the bare Au(111) surface. This result indicates that the TCNB molecules are virtually in the same electronic state as before the Fe adsorption. The situations are different when the deposition performance at room temperature. When the temperature is changed, to room temperature, the original entities transform into the Fe(TCNB)4 monomer complexes with 180° Fe-N-C bond angles. The STS above the Fe(TCNB)4 complex strongly suggest that the coordination bond had been formed between the Fe atom and the TCNB ligands. DFT calculations support the conclusions and drawn from experimental studies and assist the interpretations of experiment. Further structural complexation is achieved by the synthesis of Fe(TCNB)2 network. The network has a square structure with a regular separation of the magnetic Fe atoms in the network. The electronic information is gathered from the spectroscopic labeling of FePc to identify some of the resonances of the Fe(TCNB)2 network. There are similar features are found in the dI/dV spectra above the Fe atoms and ligand in both system, indicating that the Fe somehow feels a similar environment from the TCNB ligands in the network and in the FePc molecules. Further analysis of this feature have been disused by means of metal-ligand bond formation.