Parsimony, Phylogeny, and Genomics

Parsimony, Phylogeny, and Genomics
Author: Victor A. Albert
Publisher: OUP Oxford
Total Pages: 238
Release: 2005-03-24
Genre: Science
ISBN: 9780198564935

Parsimony analysis (cladistics) has long been one of the most widely used methods of phylogenetic inference in the fields of systematic and evolutionary biology. Moreover it has mathematical attributes that lend itself for use with complex, genomic-scale data sets. This book demonstrates the potential that this powerful hierarchical data summarization method also has for both structural and functional comparative genomic research.

Parsimony, Phylogeny, and Genomics

Parsimony, Phylogeny, and Genomics
Author: Victor Anthony Albert
Publisher: Oxford University Press on Demand
Total Pages: 229
Release: 2005
Genre: Science
ISBN: 9780199297306

"This book examines the potential that parsimony analysis (cladistics) summarization method has for both structural and functional comparative genomic research"--Provided by publisher.

Parsimony, Phylogeny, and Genomics

Parsimony, Phylogeny, and Genomics
Author: Victor A. Albert
Publisher: OUP Oxford
Total Pages: 238
Release: 2005-03-24
Genre: Science
ISBN: 0191524085

Parsimony analysis (cladistics) has long been one of the most widely used methods of phylogenetic inference in the fields of systematic and evolutionary biology. Moreover it has mathematical attributes that lend itself for use with complex, genomic-scale data sets. This book demonstrates the potential that this powerful hierarchical data summarization method also has for both structural and functional comparative genomic research.

Statistics and Truth

Statistics and Truth
Author: Calyampudi Radhakrishna Rao
Publisher: World Scientific
Total Pages: 213
Release: 1997
Genre: Mathematics
ISBN: 9810231113

Written by one of the top most statisticians with experience in diverse fields of applications of statistics, the book deals with the philosophical and methodological aspects of information technology, collection and analysis of data to provide insight into a problem, whether it is scientific research, policy making by government or decision making in our daily lives.The author dispels the doubts that chance is an expression of our ignorance which makes accurate prediction impossible and illustrates how our thinking has changed with quantification of uncertainty by showing that chance is no longer the obstructor but a way of expressing our knowledge. Indeed, chance can create and help in the investigation of truth. It is eloquently demonstrated with numerous examples of applications that statistics is the science, technology and art of extracting information from data and is based on a study of the laws of chance. It is highlighted how statistical ideas played a vital role in scientific and other investigations even before statistics was recognized as a separate discipline and how statistics is now evolving as a versatile, powerful and inevitable tool in diverse fields of human endeavor such as literature, legal matters, industry, archaeology and medicine.Use of statistics to the layman in improving the quality of life through wise decision making is emphasized.

Sequence — Evolution — Function

Sequence — Evolution — Function
Author: Eugene V. Koonin
Publisher: Springer Science & Business Media
Total Pages: 482
Release: 2013-06-29
Genre: Science
ISBN: 1475737831

Sequence - Evolution - Function is an introduction to the computational approaches that play a critical role in the emerging new branch of biology known as functional genomics. The book provides the reader with an understanding of the principles and approaches of functional genomics and of the potential and limitations of computational and experimental approaches to genome analysis. Sequence - Evolution - Function should help bridge the "digital divide" between biologists and computer scientists, allowing biologists to better grasp the peculiarities of the emerging field of Genome Biology and to learn how to benefit from the enormous amount of sequence data available in the public databases. The book is non-technical with respect to the computer methods for genome analysis and discusses these methods from the user's viewpoint, without addressing mathematical and algorithmic details. Prior practical familiarity with the basic methods for sequence analysis is a major advantage, but a reader without such experience will be able to use the book as an introduction to these methods. This book is perfect for introductory level courses in computational methods for comparative and functional genomics.

The Phylogenetic Handbook

The Phylogenetic Handbook
Author: Marco Salemi
Publisher: Cambridge University Press
Total Pages: 750
Release: 2009-03-26
Genre: Science
ISBN: 0521877105

A broad, hands on guide with detailed explanations of current methodology, relevant exercises and popular software tools.

Models and Algorithms for Genome Evolution

Models and Algorithms for Genome Evolution
Author: Cedric Chauve
Publisher: Springer Science & Business Media
Total Pages: 329
Release: 2013-09-17
Genre: Computers
ISBN: 1447152980

This authoritative text/reference presents a review of the history, current status, and potential future directions of computational biology in molecular evolution. Gathering together the unique insights of an international selection of prestigious researchers, this must-read volume examines the latest developments in the field, the challenges that remain, and the new avenues emerging from the growing influx of sequence data. These viewpoints build upon the pioneering work of David Sankoff, one of the founding fathers of computational biology, and mark the 50th anniversary of his first scientific article. The broad spectrum of rich contributions in this essential collection will appeal to all computer scientists, mathematicians and biologists involved in comparative genomics, phylogenetics and related areas.

Phylogenetics

Phylogenetics
Author: Charles Semple
Publisher: Oxford University Press on Demand
Total Pages: 258
Release: 2003
Genre: Computers
ISBN: 9780198509424

'Phylogenetics' is the reconstruction and analysis of phylogenetic (evolutionary) trees and networks based on inherited characteristics. It is a flourishing area of intereaction between mathematics, statistics, computer science and biology.The main role of phylogenetic techniques lies in evolutionary biology, where it is used to infer historical relationships between species. However, the methods are also relevant to a diverse range of fields including epidemiology, ecology, medicine, as well as linguistics and cognitive psychologyThis graduate-level book, based on the authors lectures at The University of Canterbury, New Zealand, focuses on the mathematical aspects of phylogenetics. It brings together the central results of the field (providing proofs of the main theorem), outlines their biological significance,and indicateshow algorithms may be derived. The presentation is self-contained and relies on discrete mathematics with some probability theory. A set of exercises and at least one specialist topic ends each chapter.This book is intended for biologists interested in the mathematical theory behind phylogenetic methods, and for mathematicians, statisticians, and computer scientists eager to learn about this emerging area of discrete mathematics.'Phylogenetics' in the 24th volume in the Oxford Lecture Series in Mathematics and its Applications. This series contains short books suitable for graduate students and researchers who want a well-written account of mathematics that is fundamental to current to research. The series emphasises futuredirections of research and focuses on genuine applications of mathematics to finance, engineering and the physical and biological sciences.

The Fungal Kingdom

The Fungal Kingdom
Author: Joseph Heitman
Publisher: John Wiley & Sons
Total Pages: 1161
Release: 2020-07-10
Genre: Medical
ISBN: 1555819583

Fungi research and knowledge grew rapidly following recent advances in genetics and genomics. This book synthesizes new knowledge with existing information to stimulate new scientific questions and propel fungal scientists on to the next stages of research. This book is a comprehensive guide on fungi, environmental sensing, genetics, genomics, interactions with microbes, plants, insects, and humans, technological applications, and natural product development.