A Molecular Characterization of Biogenic Secondary Organic Aerosol by High-resolution Time-of-flight Mass Spectrometry

A Molecular Characterization of Biogenic Secondary Organic Aerosol by High-resolution Time-of-flight Mass Spectrometry
Author: Felipe Daniel Lopez-Hilfiker
Publisher:
Total Pages: 178
Release: 2015
Genre:
ISBN:

The guiding question to this research is: To what extent and by what mechanisms do biogenic volatile organic compounds contribute to atmospheric aerosol mass? To address this question we need to understand the chemistry that produces condensable vapors which when in the presence of particles may partition onto the aerosol surface depending on their chemical and physical properties. I developed an insitu gas and aerosol sampling system, the FIGAERO (Filter Inlet for Gases and AEROsol) to speciate gas and particle phase organics derived from photochemical reactions with biogenic volatile organic compounds under both field and laboratory conditions. By coupling the FIGAERO to a High-Resolution Time-of-Flight Chemical Ionization Mass Spectrometer (HR-TOF-CIMS) I am able to elucidate chemical pathways by identifying elemental compositions and in some cases functional groups present in the detected molecular ions. The coupling of the FIGAERO to the HR-TOF-CIMS also allows the estimation of effective vapor pressures of the aerosol components and this information can be used to improve vapor pressure models and test associated partitioning theories and parameterizations. The approach also provides hundreds of speciated chemical tracers that can be correlated with traditional environmental and chemical measurements (e.g AMS, NOx, SO2, SMPS, VOC) to help derive sources and sinks and to constrain the mechanisms responsible for the formation and growth of organic aerosol. Measurements obtained across a wide range of conditions and locations allowing connections and contrasts between different chemical systems, providing insights into generally controlling factors of secondary organic aerosol (SOA) and its properties.

Molecular Composition and Chemical Transformation of Secondary Organic Aerosols from Biogenic Precursors

Molecular Composition and Chemical Transformation of Secondary Organic Aerosols from Biogenic Precursors
Author: Tran Bao Nguyen
Publisher:
Total Pages: 382
Release: 2012
Genre:
ISBN: 9781267427212

There are large gaps surrounding our understanding of secondary organic aerosols (SOA), which represent a significant fraction of fine particulate matter globally. One of the most difficult aspects of SOA to characterize is the molecular composition, because it is both complex and dynamic. However, the composition of SOA determines to a large extent the impact SOA has on climate, atmospheric chemistry, and human health. The main focus of this dissertation is the detailed composition analysis of SOA generated from important biogenic precursors and the characterization of chemistry induced by their simulated interaction with clouds, anthropogenic pollutants, and solar radiation. In particular, the gas- and aerosol-phase compounds associated with SOA from isoprene, the most abundant volatile organic compound emitted from the biosphere, are studied with the advanced technique of high-resolution mass spectrometry (HR MS). Many SOA compounds, particularly nitrogen-containing organics, are reported for the first time. Spectroscopy tools like UV-Vis, FT-IR and NMR are also used to characterize optical properties and molecular structures of SOA compounds. A secondary focus of this dissertation is to describe brown carbon formation from the ammonium- and amino acid-mediated aging of limonene SOA. Brown carbon changes the optical properties of SOA, but the sources are poorly understood. The experiments presented in this dissertation aim to elucidate the previously unknown precursors, kinetics and products of the reaction. The molecular detail gained from the HR-MS and spectroscopic analyses provides tremendous insight into the formation mechanism and further atmospheric reactions of SOA.

Characterization of the Molecular Composition of Secondary Organic Aerosols Using High Resolution Mass Spectrometry

Characterization of the Molecular Composition of Secondary Organic Aerosols Using High Resolution Mass Spectrometry
Author: Rachel Elizabeth Sellon
Publisher:
Total Pages: 274
Release: 2012
Genre:
ISBN:

Atmospheric aerosols can affect visibility and the Earth's climate by scattering and absorbing light and they also can have adverse effects on human health. The organic portion of atmospheric aerosols is very complex and is a major fraction of fine particulate matter. High molecular weight (high-MW)/oligomeric organic compounds can make up a large part of this organic fraction and the composition, sources, and formation mechanisms for these compounds are not well understood. This knowledge and understanding is necessary to decrease the uncertainty in the climate affects of aerosols and to improve climate models. This dissertation investigates the composition and formation mechanisms for the high-MW/oligomeric fraction of secondary organic aerosols (SOA) collected in Bakersfield, CA and presents a comparative analysis of chamber and ambient SOA, from both Los Angeles (LA) and Bakersfield, to investigate sources at both locations. A novel sampling technique, nanospray-Desorption Electrospray Ionization (nano-DESI), was used with high resolution mass spectrometry (HR-MS) to determine the molecular formulas of the high molecular weight (HMW)/oligomeric fraction of SOA. Nano-DESI involves direct desorption from the sample surface and was used to limit reactions that can take place with extraction and storage in solvent. The samples were collected in Bakersfield and LA during CalNex 2010. Both Bakersfield and LA are out of compliance with EPA standards of ozone and particulate matter and provide opportunities to examine air masses affected by both anthropogenic and biogenic sources. This dissertation has provided the first evidence of observable changes in the composition of high-MW/oligomeric compounds throughout the day. Using positive mode nano-DESI, afternoon increases in the number of compounds that contain carbon, hydrogen and oxygen (CHO) were observed consistent with photochemistry/ozonolysis as a major source for these compounds. Compounds containing reduced nitrogen groups were dominant at night and had precursors consistent with imine formation products from the reaction of carbonyls and ammonia. In the negative mode, organonitrates (CHON) and nitroxy organosulfates (CHONS) had larger numbers of compounds in the night/morning samples consistent with nitrate radical formation reactions. A subset of the CHONS compounds and compounds containing sulfur (CHOS) had the same composition as known biogenic organosulfates and nitroxy organosulfates indicating contributions from both biogenic and anthropogenic sources to the SOA. This dissertation also provides the first analysis of the high-MW/oligomeric fraction in size resolved samples; the majority of the compounds were found in aerosol diameters between 0.18-1.0 micrometers and the CHON were bimodal with size. Finally, this dissertation presents the first comparative analysis of the overlap in the composition of this fraction of SOA between ambient and chamber samples. Samples collected in Pasadena, LA and Bakersfield were compared with samples collected in a smog chamber using diesel and isoprene sources. The results indicate that diesel had the highest overlap at both sites, Bakersfield samples were more oxidized, and LA showed evidence of a SOA plume arriving from downtown LA. The addition of ammonia to the diesel chamber experiment was necessary to form many of the 2N compounds found in Bakersfield. These results increase our understanding of the types of compounds found in urban environments and give evidence for the timescales of formation reactions in an ambient environment. They show that the majority of the high-MW oligomeric compounds are found in submicron size particles and that the composition of this fraction of SOA varies with aerosol size. Results from the chamber comparisons show that both diesel and isoprene are important sources for these compounds and also that there other sources are present. Future work that combines this type of analysis, in other ambient environments, with studies of the optical properties of aerosols could be used to help improve climate models and to start to close the gap in our understanding of the climate effects of atmospheric aerosols.

Atmospheric Aerosols

Atmospheric Aerosols
Author: Rekha Kale
Publisher: Scitus Academics LLC
Total Pages: 0
Release: 2015-03
Genre: Aerosols
ISBN: 9781681171326

Atmospheric Aerosols is a vital problem in current environmental research due to its importance in atmospheric optics, energetics, radiative transfer studies, chemistry, climate, biology and public health. Aerosols can influence the energy balance of the terrestrial atmosphere, the hydrological cycle, atmospheric dynamics and monsoon circulations. Because of the heterogeneous aerosol field with large spatial and temporal variability and reduction in uncertainties in aerosol quantification is a challenging task in atmospheric sciences. Keeping this in view the present study aims to assess the impact of aerosols on coastal Indian station Visakhapatnam and the adjoining Bay of Bengal. An aerosol is a colloid of fine solid particles or liquid droplets, in air or another gas. Aerosols can be natural or not. Examples of natural aerosols are fog, forest exudates and geyser steam.

Chemical Characterization of Biogenic Secondary Organic Aerosol Generated from the Oxidation of Plant and Leaf Litter Emissions

Chemical Characterization of Biogenic Secondary Organic Aerosol Generated from the Oxidation of Plant and Leaf Litter Emissions
Author: Celia L. Faiola
Publisher:
Total Pages:
Release: 2014
Genre:
ISBN:

Atmospheric aerosol impact climate by scattering and absorbing radiation and contributing to cloud formation processes. One of the largest uncertainties in climate change predictions is due to limitations in our understanding of the formation of secondary organic aerosol (SOA). This dissertation investigated SOA formation from the oxidation of plant and leaf litter emissions in a laboratory chamber. To accurately measure the biogenic volatile organic compound (BVOC) emissions, a dynamic dilution system was developed and is described in the first study. This system was used to calibrate the GC-MS-FID and improve quantitation with a maximum instrumental error of +/-10%. In the second study, two separate sets of soil and leaf litter samples were transported from the University of Idaho experimental forest and brought back to the lab. The BVOC emissions from these samples were pumped to an aerosol growth chamber where they were oxidized to generate SOA. The resulting SOA composition was similar to SOA formed from the oxidation of other biogenic SOA precursors. Soil/leaf litter BVOC missions were compared to a canopy emission model and contributed from 12-136% of canopy emissions during spring and fall. Results suggest this could be a significiant emission source during those times of the year. In the third and fourth study, coniferous plants were treated with a plant hormone, methyl jasmonate, to simulate herbivory stress. The third study focused on the plant responses to the stress treatment by investigating changes to the BVOC emission profile. There was a high degree of inter- and intra-plant species variability. Some of the compounds most affected by the stress treatment were alpha-pinene, beta-pinene, limonene, 1,8-cineol, beta-myrcene, terpinolene, and the aromatic cymene isomers. The fourth study investigated changes to SOA composition due to changes in the BVOC emission profiles. Most pre-treatment SOA was very similar in composition with Pearson correlation coefficients between the AMS spectra greater than 0.88. The SOA generated after MeJA treatment produced aerosol mass spectra with similar m/z enhancements. This could indicate an herbivory stress mass spectral fingerprint that could be used to identify plant stress at an ecosystem scale.

Chemistry of Secondary Organic Aerosol

Chemistry of Secondary Organic Aerosol
Author: Lindsay Diana Yee
Publisher:
Total Pages: 466
Release: 2013
Genre: Electronic dissertations
ISBN:

The photooxidation of volatile organic compounds (VOCs) in the atmosphere can lead to the formation of secondary organic aerosol (SOA), a major component of fine particulate matter. Improvements to air quality require insight into the many reactive intermediates that lead to SOA formation, of which only a small fraction have been measured at the molecular level. This thesis describes the chemistry of secondary organic aerosol (SOA) formation from several atmospherically relevant hydrocarbon precursors. Photooxidation experiments of methoxyphenol and phenolic compounds and C12 alkanes were conducted in the Caltech Environmental Chamber. These experiments include the first photooxidation studies of these precursors run under sufficiently low NOx levels, such that RO2 + HO2 chemistry dominates, an important chemical regime in the atmosphere. Using online Chemical Ionization Mass Spectrometery (CIMS), key gas-phase intermediates that lead to SOA formation in these systems were identified. With complementary particle-phase analyses, chemical mechanisms elucidating the SOA formation from these compounds are proposed. Three methoxyphenol species (phenol, guaiacol, and syringol) were studied to model potential photooxidation schemes of biomass burning intermediates. SOA yields (ratio of mass of SOA formed to mass of primary organic reacted) exceeding 25% are observed. Aerosol growth is rapid and linear with the organic conversion, consistent with the formation of essentially non-volatile products. Gas and aerosol-phase oxidation products from the guaiacol system show that the chemical mechanism consists of highly oxidized aromatic species in the particle phase. Syringol SOA yields are lower than that of phenol and guaiacol, likely due to unique chemistry dependent on methoxy group position. The photooxidation of several C12 alkanes of varying structure n-dodecane, 2-methylundecane, cyclododecane, and hexylcyclohexane) were run under extended OH exposure to investigate the effect of molecular structure on SOA yields and photochemical aging. Peroxyhemiacetal formation from the reactions of several multifunctional hydroperoxides and aldehyde intermediates was found to be central to organic growth in all systems, and SOA yields increased with cyclic character of the starting hydrocarbon. All of these studies provide direction for future experiments and modeling in order to lessen outstanding discrepancies between predicted and measured SOA.

Investigation of Fundamental Processes Governing Secondary Organic Aerosol Formation in Laboratory Chambers

Investigation of Fundamental Processes Governing Secondary Organic Aerosol Formation in Laboratory Chambers
Author: Xuan Zhang
Publisher:
Total Pages: 0
Release: 2015
Genre:
ISBN:

Our understanding of the processes and mechanisms by which secondary organic aerosol (SOA) is formed is derived from laboratory chamber studies. In the atmosphere, SOA formation is primarily driven by progressive photooxidation of SOA precursors, coupled with their gas-particle partitioning. In the chamber environment, SOA-forming vapors undergo multiple chemical and physical processes that involve production and removal via gas-phase reactions; partitioning onto suspended particles vs. particles deposited on the chamber wall; and direct deposition on the chamber wall. The main focus of this dissertation is to characterize the interactions of organic vapors with suspended particles and the chamber wall and explore how these intertwined processes in laboratory chambers govern SOA formation and evolution. A Functional Group Oxidation Model (FGOM) that represents SOA formation and evolution in terms of the competition between functionalization and fragmentation, the extent of oxygen atom addition, and the change of volatility, is developed. The FGOM contains a set of parameters that are to be determined by fitting of the model to laboratory chamber data. The sensitivity of the model prediction to variation of the adjustable parameters allows one to assess the relative importance of various pathways involved in SOA formation. A critical aspect of the environmental chamber is the presence of the wall, which can induce deposition of SOA-forming vapors and promote heterogeneous reactions. An experimental protocol and model framework are first developed to constrain the vapor-wall interactions. By optimal fitting the model predictions to the observed wall-induced decay profiles of 25 oxidized organic compounds, the dominant parameter governing the extent of wall deposition of a compound is identified, i.e., wall accommodation coefficient. By correlating this parameter with the molecular properties of a compound via its volatility, the wall-induced deposition rate of an organic compound can be predicted based on its carbon and oxygen numbers in the molecule. Heterogeneous transformation of delta-hydroxycarbonyl, a major first-generation product from long-chain alkane photochemistry, is observed on the surface of particles and walls. The uniqueness of this reaction scheme is the production of substituted dihydrofuran, which is highly reactive towards ozone, OH, and NO3, thereby opening a reaction pathway that is not usually accessible to alkanes. A spectrum of highly-oxygenated products with carboxylic acid, ester, and ether functional groups is produced from the substituted dihydrofuran chemistry, thereby affecting the average oxidation state of the alkane-derived SOA. The vapor wall loss correction is applied to several chamber-derived SOA systems generated from both anthropogenic and biogenic sources. Experimental and modeling approaches are employed to constrain the partitioning behavior of SOA-forming vapors onto suspended particles vs. chamber walls. It is demonstrated that deposition of SOA-forming vapors to the chamber wall during photooxidation experiments can lead to substantial and systematic underestimation of SOA. Therefore, it is likely that a lack of proper accounting for vapor wall losses that suppress chamber-derived SOA yields contribute substantially to the underprediction of ambient SOA concentrations in atmospheric models.

Evolution of Secondary Organic Aerosol Composition, Volatility, and Absorption During Oxidation of Phenolic Compounds Under Conditions Relevant to Biomass Burning

Evolution of Secondary Organic Aerosol Composition, Volatility, and Absorption During Oxidation of Phenolic Compounds Under Conditions Relevant to Biomass Burning
Author: Carley Fredrickson
Publisher:
Total Pages: 72
Release: 2021
Genre:
ISBN:

Phenolic compounds emitted from wildfires and biomass burning (BB) are highly reactive and yield secondary organic aerosol (SOA) and brown carbon (BrC) upon oxidation initiated by the hydroxyl radical (OH) and nitrate radical (NO3). In high nitrogen dioxide (NO2) environments, such as BB plumes, phenolic oxidation is expected to form nitroaromatics in high yield which can explain in part the BrC content of associated SOA. We conducted a set of experiments as part of the Monoterpene and Oxygenated aromatics Oxidation at Night and under LIGHTs (MOONLIGHT) campaign to evaluate the chemical and physical drivers of phenolic compound evolution in high nitrogen oxide (NOx = NO + NO2) wildfire plumes, specifically investigating the composition, volatility, and absorption of the SOA components formed under OH and NO3 oxidation, with catechol as the focus of this thesis. Oxidation products in both the gas and particle phases were measured using an I- adduct high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF I- CIMS) coupled with the Filter Inlet for Gases and Aerosols (FIGAERO). Oxidation of catechol produced BrC, defined by light absorption at 405 nm, at the highest yields out of all the phenolics studied. Particle-phase nitrocatechol (C6H5NO4) was found to account for 28% and 79% of organic aerosol (OA) mass formed from OH-initiated or NO3-initiated oxidation, respectively, and was strongly associated with BrC. Effective molar yields, i.e., including chemical and physical losses, of nitrocatechol were measured to range from 0.65 to 1 for NO3-initiated oxidation, and 0.03 for OH oxidation conditions. Maximum SOA mass yields from catechol oxidation were strongly tied to formation of nitrocatechol, ranging from 0.38 to 1.63 for the different experiments, lower than previously reported values. Higher SOA mass yields from catechol oxidation were found for NO3 rather than OH oxidation. The effective volatility of the SOA measured with the FIGAERO thermograms decreased significantly with subsequent aging after formation. Gas-particle partitioning measurements imply the saturation vapor concentration of nitrocatechol to be roughly 5 [micrograms] m-3, while the FIGAERO thermogram model estimate is lower but in the same order of magnitude, implying that wildfire gas-particle partitioning of nitroaromatics is likely dynamic. Group contribution method estimates of nitrocatechol saturation concentration range across 8 orders of magnitude with 3 [micrograms] m-3 from the Nannoolal method paired with the Joback and Reid boiling point method being closest to our observational estimates. In extended photochemical aging experiments, BrC formed from catechol oxidation had a photochemical lifetime of ~12 hours, while that of particulate nitrocatechol ranged from 7 hours if formed by NO3 oxidation to 18 hours if formed by OH oxidation. Implications for atmospheric evolution of BrC in wildfire and mechanisms of particulate nitroaromatic losses are discussed.

Formation and Chemical Evolution of Secondary Organic Aerosol from Aqueous-phase Reactions of Atmospheric Phenols

Formation and Chemical Evolution of Secondary Organic Aerosol from Aqueous-phase Reactions of Atmospheric Phenols
Author: Lu Yu
Publisher:
Total Pages:
Release: 2016
Genre:
ISBN: 9781339824093

Secondary organic aerosol (SOA) is formed and transformed in atmospheric aqueous phases (e.g., cloud and fog droplets and deliquesced airborne particles containing small amounts of water) through a multitude of chemical and physical processes. Understanding the formation and transformation processes of SOA via aqueous-phase reactions is important for properly presenting its atmospheric evolution pathways in models and for elucidating its climate and health effects. Phenolic compounds, which are emitted in significant amounts from biomass burning, can undergo fast reactions in atmospheric aqueous phases to form secondary organic aerosol (aqSOA). In this study, we investigate the formation and evolution of phenol (C6H6O), guaiacol (C7H8O2; 2-methoxyphenol) and syringol (C8H10O3; 2,6-dimethoxyphenol) and with two major aqueous phase oxidants -- the triplet excited state of an aromatic carbonyl (3C*) and hydroxyl radical (·OH) - and interpret the reaction mechanisms. In addition, given that dissolved organic matter (DOM) is an important component of fog and cloud water and that it can undergo aqueous reactions to form more oxidized, less volatile species, we further investigate the photochemical processing of DOM in fog water to gain insights into the aqueous-phase processing of organic aerosol (OA) in the atmosphere. In Chapter 2, we thoroughly characterize the bulk chemical and molecular compositions of phenolic aqSOA formed at half-life (t[subscript 1/2]), and interpret the formation mechanisms. We find that phenolic aqSOA formed at t[subscript 1/2] is highly oxygenated with atomic oxygen-to-carbon ratio (O/C) in the range of 0.85-1.23. Dimers, higher oligomers (up to hexamers), functionalized monomers and oligomers with carbonyl, carboxyl, and hydroxyl groups, and small organic acids are detected. Compared with ·OH-mediated reactions, reactions mediated by 3C* are faster and produce more oligomers and hydroxylated species at t[subscript1/2]. We also find that aqSOA shows enhanced light absorption in the UV-vis region, suggesting that aqueous-phase reactions of phenols are an important source of secondary brown carbon in the atmosphere, especially in regions impacted by biomass burning. In Chapter 3, we investigate the chemical evolution of phenolic aqSOA via aqueous-phase reactions on the molecular level and interpret the aging mechanisms. Our results indicate that oligomerization is an important aqueous reaction pathway for phenols, especially during the initial stage of photooxidation. Functionalization and fragmentation become dominant at later stages, forming a variety of functionalized aromatic and ring-opening products with higher carbon oxidation states. Fragmentation reactions eventually dominate the photochemical evolution of phenolic aqSOA, forming a large number of highly oxygenated ring-opening molecules. In addition, phenolic aqSOA has a wide range of saturation vapor pressures (C*), varying from 10−20 [mu]g m−3 for functionalized phenolic oligomers to 10 [mu]g m−3 for ring-opening species with number of carbon less than 6. The detection of abundant extremely low volatile organic compounds (ELVOC) indicates that aqueous reactions of phenolic compounds are likely an important source of ELVOC in the atmosphere. Chapter 3 investigates the molecular transformation with aging based on the characterization of three aqSOA filter samples collected at the defined time intervals of the photoreaction. However, the chemical evolution of aqSOA products with hours of illumination at a higher time resolution is largely unknown. In Chapter 4, we investigate the chemical evolution of aqSOA at a 1-min time resolution based on high-resolution aerosol mass spectrometer (AMS) analysis. This is important for understanding the continuous evolution of phenolic aqSOA with aging as well as for elucidating the formation and transformation of different generations of products. Our results suggest that dimer and higher-order oligomers (trimers, tetramers, etc.) are formed continuously during the first 1-2 hours of photoreaction but show a gradual decrease afterwards. Functionalized derivatives grow at a later time and then gradually decrease. Highly oxidized ring-opening species continuously increase over the course of reactions. Positive matrix factorization (PMF) analysis of the AMS spectra of phenolic aqSOA identifies multiple factors, representing different generations of products. The 1st-generation products include dimers, higher-order oligomers and their oxygenated derivatives. The 2nd-generation products include oxygenated monomeric derivatives. The 3rd-generation products include highly oxidized ring-opening species. In Chapter 5, we investigate the evolution of dissolved organic matter (DOM) in fog water. Our results show that the mass concentration of DOM[subscript OA] (i.e., low-volatility DOM in fog water) is enhanced over the course of illumination, with continuous increase of O/C and atomic nitrogen-to-carbon ratio (N/C). The increase of DOM[subscript OA] is due to the incorporation of oxygen- and nitrogen-containing functional groups into the molecules. The aqueous aging of DOM[subscript OA] can be modeled as a linear combination of the dynamic variations of 3 factors using PMF analysis. Factor 1 is chemically similar to the DOM[subscript OA] before illumination, which is quickly reacted away. Factor 2 is representative of an intermediate component, which is first formed and then transformed, and O/C of Factor 2 is intermediate between that of Factor 1 and Factor 3. Factor 3 represents highly oxidized final products, which is continuously formed during illumination. Fog DOM absorbs significantly in the tropospheric sunlight wavelengths, but this absorption behavior stays almost constant over the course of illumination, despite the significant change in chemical composition.