Mathematical Principles of Topological and Geometric Data Analysis

Mathematical Principles of Topological and Geometric Data Analysis
Author: Parvaneh Joharinad
Publisher: Springer Nature
Total Pages: 287
Release: 2023-07-29
Genre: Mathematics
ISBN: 303133440X

This book explores and demonstrates how geometric tools can be used in data analysis. Beginning with a systematic exposition of the mathematical prerequisites, covering topics ranging from category theory to algebraic topology, Riemannian geometry, operator theory and network analysis, it goes on to describe and analyze some of the most important machine learning techniques for dimension reduction, including the different types of manifold learning and kernel methods. It also develops a new notion of curvature of generalized metric spaces, based on the notion of hyperconvexity, which can be used for the topological representation of geometric information. In recent years there has been a fascinating development: concepts and methods originally created in the context of research in pure mathematics, and in particular in geometry, have become powerful tools in machine learning for the analysis of data. The underlying reason for this is that data are typically equipped with some kind of notion of distance, quantifying the differences between data points. Of course, to be successfully applied, the geometric tools usually need to be redefined, generalized, or extended appropriately. Primarily aimed at mathematicians seeking an overview of the geometric concepts and methods that are useful for data analysis, the book will also be of interest to researchers in machine learning and data analysis who want to see a systematic mathematical foundation of the methods that they use.

Computational Topology for Data Analysis

Computational Topology for Data Analysis
Author: Tamal Krishna Dey
Publisher: Cambridge University Press
Total Pages: 456
Release: 2022-03-10
Genre: Mathematics
ISBN: 1009103199

Topological data analysis (TDA) has emerged recently as a viable tool for analyzing complex data, and the area has grown substantially both in its methodologies and applicability. Providing a computational and algorithmic foundation for techniques in TDA, this comprehensive, self-contained text introduces students and researchers in mathematics and computer science to the current state of the field. The book features a description of mathematical objects and constructs behind recent advances, the algorithms involved, computational considerations, as well as examples of topological structures or ideas that can be used in applications. It provides a thorough treatment of persistent homology together with various extensions – like zigzag persistence and multiparameter persistence – and their applications to different types of data, like point clouds, triangulations, or graph data. Other important topics covered include discrete Morse theory, the Mapper structure, optimal generating cycles, as well as recent advances in embedding TDA within machine learning frameworks.

Topological Data Analysis with Applications

Topological Data Analysis with Applications
Author: Gunnar Carlsson
Publisher: Cambridge University Press
Total Pages: 233
Release: 2021-12-16
Genre: Computers
ISBN: 1108838650

This timely text introduces topological data analysis from scratch, with detailed case studies.

Geometric and Topological Inference

Geometric and Topological Inference
Author: Jean-Daniel Boissonnat
Publisher: Cambridge University Press
Total Pages: 247
Release: 2018-09-27
Genre: Computers
ISBN: 1108419399

A rigorous introduction to geometric and topological inference, for anyone interested in a geometric approach to data science.

Computational Topology for Data Analysis

Computational Topology for Data Analysis
Author: Tamal Krishna Dey
Publisher: Cambridge University Press
Total Pages: 455
Release: 2022-03-10
Genre: Computers
ISBN: 1009098160

This book provides a computational and algorithmic foundation for techniques in topological data analysis, with examples and exercises.

Principles of Topology

Principles of Topology
Author: Fred H. Croom
Publisher: Courier Dover Publications
Total Pages: 340
Release: 2016-02-17
Genre: Mathematics
ISBN: 0486801543

Originally published: Philadelphia: Saunders College Publishing, 1989; slightly corrected.

Topological Data Analysis for Genomics and Evolution

Topological Data Analysis for Genomics and Evolution
Author: Raúl Rabadán
Publisher: Cambridge University Press
Total Pages: 521
Release: 2019-10-31
Genre: Science
ISBN: 1108753396

Biology has entered the age of Big Data. The technical revolution has transformed the field, and extracting meaningful information from large biological data sets is now a central methodological challenge. Algebraic topology is a well-established branch of pure mathematics that studies qualitative descriptors of the shape of geometric objects. It aims to reduce questions to a comparison of algebraic invariants, such as numbers, which are typically easier to solve. Topological data analysis is a rapidly-developing subfield that leverages the tools of algebraic topology to provide robust multiscale analysis of data sets. This book introduces the central ideas and techniques of topological data analysis and its specific applications to biology, including the evolution of viruses, bacteria and humans, genomics of cancer and single cell characterization of developmental processes. Bridging two disciplines, the book is for researchers and graduate students in genomics and evolutionary biology alongside mathematicians interested in applied topology.

Principles of Topology

Principles of Topology
Author: Fred H. Croom
Publisher: Courier Dover Publications
Total Pages: 340
Release: 2016-03-17
Genre: Mathematics
ISBN: 0486810445

Topology is a natural, geometric, and intuitively appealing branch of mathematics that can be understood and appreciated by students as they begin their study of advanced mathematical topics. Designed for a one-semester introduction to topology at the undergraduate and beginning graduate levels, this text is accessible to students familiar with multivariable calculus. Rigorous but not abstract, the treatment emphasizes the geometric nature of the subject and the applications of topological ideas to geometry and mathematical analysis. Customary topics of point-set topology include metric spaces, general topological spaces, continuity, topological equivalence, basis, subbasis, connectedness, compactness, separation properties, metrization, subspaces, product spaces, and quotient spaces. In addition, the text introduces geometric, differential, and algebraic topology. Each chapter includes historical notes to put important developments into their historical framework. Exercises of varying degrees of difficulty form an essential part of the text.

Computational Topology

Computational Topology
Author: Herbert Edelsbrunner
Publisher: American Mathematical Society
Total Pages: 241
Release: 2022-01-31
Genre: Mathematics
ISBN: 1470467690

Combining concepts from topology and algorithms, this book delivers what its title promises: an introduction to the field of computational topology. Starting with motivating problems in both mathematics and computer science and building up from classic topics in geometric and algebraic topology, the third part of the text advances to persistent homology. This point of view is critically important in turning a mostly theoretical field of mathematics into one that is relevant to a multitude of disciplines in the sciences and engineering. The main approach is the discovery of topology through algorithms. The book is ideal for teaching a graduate or advanced undergraduate course in computational topology, as it develops all the background of both the mathematical and algorithmic aspects of the subject from first principles. Thus the text could serve equally well in a course taught in a mathematics department or computer science department.

Topological Methods in Data Analysis and Visualization

Topological Methods in Data Analysis and Visualization
Author: Valerio Pascucci
Publisher: Springer Science & Business Media
Total Pages: 265
Release: 2010-11-23
Genre: Mathematics
ISBN: 3642150144

Topology-based methods are of increasing importance in the analysis and visualization of datasets from a wide variety of scientific domains such as biology, physics, engineering, and medicine. Current challenges of topology-based techniques include the management of time-dependent data, the representation of large and complex datasets, the characterization of noise and uncertainty, the effective integration of numerical methods with robust combinatorial algorithms, etc. . The editors have brought together the most prominent and best recognized researchers in the field of topology-based data analysis and visualization for a joint discussion and scientific exchange of the latest results in the field. This book contains the best 20 peer-reviewed papers resulting from the discussions and presentations at the third workshop on "Topological Methods in Data Analysis and Visualization", held 2009 in Snowbird, Utah, US. The 2009 "TopoInVis" workshop follows the two successful workshops in 2005 (Slovakia) and 2007 (Germany).