Genetics, Genomics and Breeding of Sorghum

Genetics, Genomics and Breeding of Sorghum
Author: Yi-Hong Wang
Publisher: CRC Press
Total Pages: 368
Release: 2014-07-08
Genre: Science
ISBN: 1482210088

Sorghum is one of the hardiest crop plants in modern agriculture and also one of the most versatile. Its seeds provide calorie for food and feed, stalks for building and industrial materials and its juice for syrup. This book provides an in-depth review of the cutting-edge knowledge in sorghum genetics and its applications in sorghum breeding. Each chapter is authored by specialists in their fields to report the latest trends and findings. The book showcases the definitive value of sorghum as a model system to study the genetic basis of crop productivity and stress tolerance and will provide a foundation for future studies in sorghum genetics, genomics, and breeding.

Studies on Genetic Parameters of Agronomic, Grain Structure, and Malting Characteristics of Sorghum (Sorghum Bicolor (L.) Moench)

Studies on Genetic Parameters of Agronomic, Grain Structure, and Malting Characteristics of Sorghum (Sorghum Bicolor (L.) Moench)
Author: José Geraldo Eugênio De França
Publisher:
Total Pages: 412
Release: 1990
Genre: Heterosis
ISBN:

This study had two distinct components: an agronomic/breeding segment and a sorghum malt component. The first consisted of field avaluation for traits related to agronomic performance, combinig ability, and heterosis. It was conducted during 1988 and 1989. The 1988 trial, with 51 genotypes, was sown at College Station and Halfway, TX. During 1989, the trial consisted of 7 females and 13 male parents, their 91 hybrids, a common check (ATx399*RTx430), and another hybrid check in one subset (ATx399*sc103-12E) to balance the whole design. It was conducted at College Station, Halfway, Chillicothe, and Corpus Christi, TX. In the first year each trial was divided into 4 subsets, while during the second, the trial consisted of 8 subsets, each with 15 experiment units.Hybrids, generally had larger panicles and higher yields, were taller, reached anthesis earlier, showed superior harvest indices, and lodged more than the parents. Combinig ability and GCA:SCA mean square ratios showed that general combinig ability variances were significant for all the variables studied. It showed also that additive variance was more important in controlling the genetic expression for the traits measured. The most superior parental lines for grain yield, across environments were ATx631, ATx623, ATx378, RTx430, R8505, VG146 and Dorado. Grain was saved from the field trials to be used in evaluation of some grain and malt characteristics. Sorghum beer is an important components of Africa culture and is used as a food or drink in many (...).

Agronomic, Genetic and Genomic Approaches for Predicting Heterosis in Sorghum [Sorghum Bicolor (L.) Moench]

Agronomic, Genetic and Genomic Approaches for Predicting Heterosis in Sorghum [Sorghum Bicolor (L.) Moench]
Author: Frank Maulana
Publisher:
Total Pages:
Release: 2016
Genre:
ISBN:

The approach used to identify inbred lines that can produce superior hybrids is costly and time-consuming. It requires creation of all possible crosses and evaluation of the crosses to estimate combining abilities for the desired traits. Predicting heterosis or hybrid performance in any way possible may help to reduce the number of crosses to be made and evaluated. In this study, four sets of experiments were conducted to determine whether heterosis can be predicted based on inbred line performance, genetic distance between parents and genomic prediction model. The first experiment was aimed at assessing the levels of genetic diversity, population structure and linkage disequilibrium (LD) in 279 public sorghum inbred lines, based on 66,265 SNPs generated using the genotyping-by-sequencing (GBS) platform. The inbred lines were developed at different times over the last two decades and harbor robust diversity in pedigree and agronomic characteristics. Some of the inbreds are resistant to Acetolactate synthase (ALS) and Acetyl co-enzyme-A carboxylase (ACC) inhibitor herbicides. The mean polymorphic information content (PIC) and gene diversity across the entire inbreds were 0.35 and 0.46, respectively with non-herbicide resistant inbreds harboring more diversity than the herbicide resistant ones. The population structure analysis clustered the inbred lines into three major subgroups according to pedigree and fertility-reaction with the maintainer lines (B-lines) distinctly forming a separate cluster. Analysis of molecular variance (AMOVA) revealed more variation within subgroups than among subgroups. Substantial linkage disequilibrium (LD) was detected between the markers in the population with marked variation between chromosomes. This information may facilitate the use of the inbreds in sorghum breeding programs and provide perspectives for optimizing marker density for gene mapping and marker-assisted breeding. The second experiment, based on 102 F1 hybrids developed by intercrossing closely and distantly related inbreds, was conducted to investigate the relationship of genetic distance between parents with hybrid vigor or heterosis. The F1 hybrids alongside their parents were evaluated at two environments in a randomized complete block design with three replications. The results show that correlations of genetic distance between parents with hybrid performance and heterosis were variable and dependent on the trait. Though most were statistically non-significant and not strong to be used as predictor for heterosis, the results tend to show that certain level of genetic distance between parents is needed to capture maximum heterosis and hybrid performance. The objective of the third research study was to determine whether traits measured on parents can be used to predict hybrid performance in sorghum and to assess the combining ability of selected inbreds. Forty-six parental inbred lines and 75 F1 hybrids generated from intercrossing the inbreds were evaluated in four environments in a randomized complete block design with three replications. The average performance of the parents (mid-parent) was significantly correlated with hybrid performance for thousand kernel weight, days to flowering and plant height. Significant general (GCA) and specific (SCA) combining abilities were observed for most traits, with highly significant GCA effects observed for most traits as compared to SCA indicating that additive genetic effects are more important in affecting the inheritance of the traits measured. Results show that studying parental inbred line performance could generate important information for predicting hybrid performance in sorghum. The fourth experiment was aimed at assessing the efficacy of genomic prediction of hybrid performance in sorghum. Genomic prediction was performed with five-fold cross-validation procedure on 204 F1 hybrids developed using 102 inbred lines. A total of 66,265 SNP markers generated using genotyping-by-sequencing were used in this study. Results showed that increasing training population size increased prediction accuracies for all traits with the effect being different for different traits. Also, considering additive effects alone versus additive and dominance effects in the model showed similar trend of prediction accuracy but the full model (considering both additive and dominance effects of the markers) provided better prediction at least for some of the traits. The results suggest that genomic prediction could become an effective tool for predicting the performance of untested sorghum hybrids thus adding efficiency to hybrid selection.

Amaranth Biology, Chemistry, and Technology

Amaranth Biology, Chemistry, and Technology
Author: Octavio Paredes-Lopez
Publisher: CRC Press
Total Pages: 271
Release: 2018-01-10
Genre: Science
ISBN: 1351086502

This book is devoted to amaranth, a plant to which 45 species are indigenous to the Mesoamerican region and 10 others originated in Africa, Asia, and Europe. Amaranth was the foundation of the extensive North and South American ancient civilizations and is still important in the agriculture of more recent Indian cultures. However, this plant nearly disappeared after the Spanish conquest. In view of the outstanding agronomic performance of the plant and the high nutritional value of the grain, it is now becoming an important crop in various regions of the world. Progress in the utilization of amaranth is directly related to scientific and technical information on its biological, physical, and chemical properties. Amaranth: Biology, Chemistry, and Technology begins with a chapter on the use of tissue culture, molecular biology, and genetic engineering techniques for crop improvement. The next few chapters deal with classical genetics, traditional plant breeding, and plant physiology. Following chapters review the properties of storage and leaf proteins, carbohydrates (especially starch), and seed oil. The potential of amaranth for new food products and popping is discussed, and commercialization and marketing of amaranth and its products are described. The book also emphasizes the outstanding nutritional properties of amaranth.