Breeding for drought and nitrogen stress tolerance in maize: From theory to practice

Breeding for drought and nitrogen stress tolerance in maize: From theory to practice
Author: M. Bänzinger
Publisher: CIMMYT
Total Pages: 69
Release: 2000
Genre:
ISBN: 9706480463

Introduction - why breed for drought and low N tolerance?; Conceptual framework - breeding; Conventional approaches to improving the drought and low N tolerance of maize; Conventional approaches challenged; The challenge of breeding for drought and low N tolerance; Maize under drought and low N stress; Conceptual framework - physiology; Water and the maize plant; Nitrogen and the maize plant; Maize under drought and low N stress - consequences for breeding; Stress management; Drought; Low N stress; Statistical designs and layout of experiments; Increasing the number of replicates; Improved statistical designs; Field layout; Border effects from alleys; Secondary traits; Why use secondary traits?; How do we decide on the value of secondary traits in a drought or low N breeding program?; Secondary traits that help to identify drought tolerance; Secondary traits that help to identify low N tolerance: Selection indices - Combining information on secondary traits with grain yield; Combining information from various experiments; Breeding strategies; Choice of germplasm; Breeding schemes; Biotechnology: potential and constraints for improving drought and low N tolerance; The role of the farmer in selection; What is farmer participatory research and why is it important?; What is new about farmer participatory research?; Participatory methodologies.

Plant Breeding Reviews, Volume 9

Plant Breeding Reviews, Volume 9
Author: Jules Janick
Publisher: John Wiley & Sons
Total Pages: 416
Release: 2010-04-20
Genre: Science
ISBN: 0470650354

Plant Breeding Reviews is an ongoing series presenting state-of-the art review articles on research in plant genetics, especially the breeding of commercially important crops. Articles perform the valuable function of collecting, comparing, and contrasting the primary journal literature in order to form an overview of the topic. This detailed analysis bridges the gap between the specialized researcher and the broader community of plant scientists.

Quantitative Genetics in Maize Breeding

Quantitative Genetics in Maize Breeding
Author: Arnel R. Hallauer
Publisher: Springer Science & Business Media
Total Pages: 669
Release: 2010-09-28
Genre: Science
ISBN: 1441907661

Maize is used in an endless list of products that are directly or indirectly related to human nutrition and food security. Maize is grown in producer farms, farmers depend on genetically improved cultivars, and maize breeders develop improved maize cultivars for farmers. Nikolai I. Vavilov defined plant breeding as plant evolution directed by man. Among crops, maize is one of the most successful examples for breeder-directed evolution. Maize is a cross-pollinated species with unique and separate male and female organs allowing techniques from both self and cross-pollinated crops to be utilized. As a consequence, a diverse set of breeding methods can be utilized for the development of various maize cultivar types for all economic conditions (e.g., improved populations, inbred lines, and their hybrids for different types of markets). Maize breeding is the science of maize cultivar development. Public investment in maize breeding from 1865 to 1996 was $3 billion (Crosbie et al., 2004) and the return on investment was $260 billion as a consequence of applied maize breeding, even without full understanding of the genetic basis of heterosis. The principles of quantitative genetics have been successfully applied by maize breeders worldwide to adapt and improve germplasm sources of cultivars for very simple traits (e.g. maize flowering) and very complex ones (e.g., grain yield). For instance, genomic efforts have isolated early-maturing genes and QTL for potential MAS but very simple and low cost phenotypic efforts have caused significant and fast genetic progress across genotypes moving elite tropical and late temperate maize northward with minimal investment. Quantitative genetics has allowed the integration of pre-breeding with cultivar development by characterizing populations genetically, adapting them to places never thought of (e.g., tropical to short-seasons), improving them by all sorts of intra- and inter-population recurrent selection methods, extracting lines with more probability of success, and exploiting inbreeding and heterosis. Quantitative genetics in maize breeding has improved the odds of developing outstanding maize cultivars from genetically broad based improved populations such as B73. The inbred-hybrid concept in maize was a public sector invention 100 years ago and it is still considered one of the greatest achievements in plant breeding. Maize hybrids grown by farmers today are still produced following this methodology and there is still no limit to genetic improvement when most genes are targeted in the breeding process. Heterotic effects are unique for each hybrid and exotic genetic materials (e.g., tropical, early maturing) carry useful alleles for complex traits not present in the B73 genome just sequenced while increasing the genetic diversity of U.S. hybrids. Breeding programs based on classical quantitative genetics and selection methods will be the basis for proving theoretical approaches on breeding plans based on molecular markers. Mating designs still offer large sample sizes when compared to QTL approaches and there is still a need to successful integration of these methods. There is a need to increase the genetic diversity of maize hybrids available in the market (e.g., there is a need to increase the number of early maturing testers in the northern U.S.). Public programs can still develop new and genetically diverse products not available in industry. However, public U.S. maize breeding programs have either been discontinued or are eroding because of decreasing state and federal funding toward basic science. Future significant genetic gains in maize are dependent on the incorporation of useful and unique genetic diversity not available in industry (e.g., NDSU EarlyGEM lines). The integration of pre-breeding methods with cultivar development should enhance future breeding efforts to maintain active public breeding programs not only adapting and improving genetically broad-based germplasm but also developing unique products and training the next generation of maize breeders producing research dissertations directly linked to breeding programs. This is especially important in areas where commercial hybrids are not locally bred. More than ever public and private institutions are encouraged to cooperate in order to share breeding rights, research goals, winter nurseries, managed stress environments, and latest technology for the benefit of producing the best possible hybrids for farmers with the least cost. We have the opportunity to link both classical and modern technology for the benefit of breeding in close cooperation with industry without the need for investing in academic labs and time (e.g., industry labs take a week vs months/years in academic labs for the same work). This volume, as part of the Handbook of Plant Breeding series, aims to increase awareness of the relative value and impact of maize breeding for food, feed, and fuel security. Without breeding programs continuously developing improved germplasm, no technology can develop improved cultivars. Quantitative Genetics in Maize Breeding presents principles and data that can be applied to maximize genetic improvement of germplasm and develop superior genotypes in different crops. The topics included should be of interest of graduate students and breeders conducting research not only on breeding and selection methods but also developing pure lines and hybrid cultivars in crop species. This volume is a unique and permanent contribution to breeders, geneticists, students, policy makers, and land-grant institutions still promoting quality research in applied plant breeding as opposed to promoting grant monies and indirect costs at any short-term cost. The book is dedicated to those who envision the development of the next generation of cultivars with less need of water and inputs, with better nutrition; and with higher percentages of exotic germplasm as well as those that pursue independent research goals before searching for funding. Scientists are encouraged to use all possible breeding methodologies available (e.g., transgenics, classical breeding, MAS, and all possible combinations could be used with specific sound long and short-term goals on mind) once germplasm is chosen making wise decisions with proven and scientifically sound technologies for assisting current breeding efforts depending on the particular trait under selection. Arnel R. Hallauer is C. F. Curtiss Distinguished Professor in Agriculture (Emeritus) at Iowa State University (ISU). Dr. Hallauer has led maize-breeding research for mid-season maturity at ISU since 1958. His work has had a worldwide impact on plant-breeding programs, industry, and students and was named a member of the National Academy of Sciences. Hallauer is a native of Kansas, USA. José B. Miranda Filho is full-professor in the Department of Genetics, Escola Superior de Agricultura Luiz de Queiroz - University of São Paulo located at Piracicaba, Brazil. His research interests have emphasized development of quantitative genetic theory and its application to maize breeding. Miranda Filho is native of Pirassununga, São Paulo, Brazil. M.J. Carena is professor of plant sciences at North Dakota State University (NDSU). Dr. Carena has led maize-breeding research for short-season maturity at NDSU since 1999. This program is currently one the of the few public U.S. programs left integrating pre-breeding with cultivar development and training in applied maize breeding. He teaches Quantitative Genetics and Crop Breeding Techniques at NDSU. Carena is a native of Buenos Aires, Argentina. http://www.ag.ndsu.nodak.edu/plantsci/faculty/Carena.htm

Genetic Data Analysis for Plant and Animal Breeding

Genetic Data Analysis for Plant and Animal Breeding
Author: Fikret Isik
Publisher: Springer
Total Pages: 409
Release: 2017-09-09
Genre: Science
ISBN: 3319551779

This book fills the gap between textbooks of quantitative genetic theory, and software manuals that provide details on analytical methods but little context or perspective on which methods may be most appropriate for a particular application. Accordingly this book is composed of two sections. The first section (Chapters 1 to 8) covers topics of classical phenotypic data analysis for prediction of breeding values in animal and plant breeding programs. In the second section (Chapters 9 to 13) we provide the concept and overall review of available tools for using DNA markers for predictions of genetic merits in breeding populations. With advances in DNA sequencing technologies, genomic data, especially single nucleotide polymorphism (SNP) markers, have become available for animal and plant breeding programs in recent years. Analysis of DNA markers for prediction of genetic merit is a relatively new and active research area. The algorithms and software to implement these algorithms are changing rapidly. This section represents state-of-the-art knowledge on the tools and technologies available for genetic analysis of plants and animals. However, readers should be aware that the methods or statistical packages covered here may not be available or they might be out of date in a few years. Ultimately the book is intended for professional breeders interested in utilizing these tools and approaches in their breeding programs. Lastly, we anticipate the usage of this volume for advanced level graduate courses in agricultural and breeding courses.

Selection Methods in Plant Breeding

Selection Methods in Plant Breeding
Author: Izak Bos
Publisher: Springer Science & Business Media
Total Pages: 462
Release: 2007-10-26
Genre: Science
ISBN: 1402063709

Written for plant breeders, researchers and post-graduate students, this excellent new book provides a comprehensive review of the methods and underlying theoretical foundations used for selection in plant breeding programs. The authors review basic elements of population and quantitative genetic theory, moving on to consider in a unique way the tackling of the problems presented by soil heterogeneity and intergenotypic competition when selecting quantitative characters.

Plant Breeding

Plant Breeding
Author: M.D. Hayward
Publisher: Springer
Total Pages: 550
Release: 1993-05-31
Genre: Science
ISBN: 0412433907

Our requirement for plant breeders to be successful has never been greater. However one views the forecasted numbers for future population growth we will need, in the immediate future, to be feeding, clothing and housing many more people than we do, inadequately, at present. Plant breeding represents the most valuable strategy in increasing our productivity in a way that is sustainable and environmentally sensitive. Plant breeding can rightly be considered as one of the oldest multidisciplinary subjects that is known to humans. It was practised by people who first started to carry out a settled form of agriculture. The art, as it must have been at that stage, was applied without any formal underlying framework, but achieved dramatic results, as witnessed by the forms of cultivated plants we have today. We are now learning how to apply successfully the results of yet imperfect scientific knowledge. This knowledge is, however, rapidly developing, particularly in areas of tissue culture, biotechnology and molecular biology. Plant breeding's inherent multifaceted nature means that alongside obvious subject areas like genetics we also need to consider areas such as: statistics, physiology, plant pathology, entomology, biochemistry, weed science, quality, seed characteristics, repro ductive biology, trial design, selection and computing. It therefore seems apparent that modern plant breeders need to have a grasp of wide range of scientific knowledge and expertise if they are successfully to a exploit the techniques, protocols and strategies which are open to them.

Applied Plant Genomics and Biotechnology

Applied Plant Genomics and Biotechnology
Author: Palmiro Poltronieri
Publisher: Woodhead Publishing
Total Pages: 354
Release: 2015-01-27
Genre: Science
ISBN: 0081000715

Applied plant genomics and biotechnology reviews the recent advancements in the post-genomic era, discussing how different varieties respond to abiotic and biotic stresses, investigating epigenetic modifications and epigenetic memory through analysis of DNA methylation states, applicative uses of RNA silencing and RNA interference in plant physiology and in experimental transgenics, and plants modified to produce high-value pharmaceutical proteins. The book provides an overview of research advances in application of RNA silencing and RNA interference, through Virus-based transient gene expression systems, Virus induced gene complementation (VIGC), Virus induced gene silencing (Sir VIGS, Mr VIGS) Virus-based microRNA silencing (VbMS) and Virus-based RNA mobility assays (VRMA); RNA based vaccines and expression of virus proteins or RNA, and virus-like particles in plants, the potential of virus vaccines and therapeutics, and exploring plants as factories for useful products and pharmaceuticals are topics wholly deepened. The book reviews and discuss Plant Functional Genomic studies discussing the technologies supporting the genetic improvement of plants and the production of plant varieties more resistant to biotic and abiotic stresses. Several important crops are analysed providing a glimpse on the most up-to-date methods and topics of investigation. The book presents a review on current state of GMO, the cisgenesis-derived plants and novel plant products devoid of transgene elements, discuss their regulation and the production of desired traits such as resistance to viruses and disease also in fruit trees and wood trees with long vegetative periods. Several chapters cover aspects of plant physiology related to plant improvement: cytokinin metabolism and hormone signaling pathways are discussed in barley; PARP-domain proteins involved in Stress-Induced Morphogenetic Response, regulation of NAD signaling and ROS dependent synthesis of anthocyanins. Apple allergen isoforms and the various content in different varieties are discussed and approaches to reduce their presence. Euphorbiaceae, castor bean, cassava and Jathropa are discussed at genomic structure, their diseases and viruses, and methods of transformation. Rice genomics and agricultural traits are discussed, and biotechnology for engineering and improve rice varieties. Mango topics are presented with an overview of molecular methods for variety differentiation, and aspects of fruit improvement by traditional and biotechnology methods. Oilseed rape is presented, discussing the genetic diversity, quality traits, genetic maps, genomic selection and comparative genomics for improvement of varieties. Tomato studies are presented, with an overview on the knowledge of the regulatory networks involved in flowering, methods applied to study the tomato genome-wide DNA methylation, its regulation by small RNAs, microRNA-dependent control of transcription factors expression, the development and ripening processes in tomato, genomic studies and fruit modelling to establish fleshy fruit traits of interest; the gene reprogramming during fruit ripening, and the ethylene dependent and independent DNA methylation changes. - provides an overview on the ongoing projects and activities in the field of applied biotechnology - includes examples of different crops and applications to be exploited - reviews and discusses Plant Functional Genomic studies and the future developments in the field - explores the new technologies supporting the genetic improvement of plants