Clinical Text Mining

Clinical Text Mining
Author: Hercules Dalianis
Publisher: Springer
Total Pages: 192
Release: 2018-05-14
Genre: Computers
ISBN: 3319785036

This open access book describes the results of natural language processing and machine learning methods applied to clinical text from electronic patient records. It is divided into twelve chapters. Chapters 1-4 discuss the history and background of the original paper-based patient records, their purpose, and how they are written and structured. These initial chapters do not require any technical or medical background knowledge. The remaining eight chapters are more technical in nature and describe various medical classifications and terminologies such as ICD diagnosis codes, SNOMED CT, MeSH, UMLS, and ATC. Chapters 5-10 cover basic tools for natural language processing and information retrieval, and how to apply them to clinical text. The difference between rule-based and machine learning-based methods, as well as between supervised and unsupervised machine learning methods, are also explained. Next, ethical concerns regarding the use of sensitive patient records for research purposes are discussed, including methods for de-identifying electronic patient records and safely storing patient records. The book’s closing chapters present a number of applications in clinical text mining and summarise the lessons learned from the previous chapters. The book provides a comprehensive overview of technical issues arising in clinical text mining, and offers a valuable guide for advanced students in health informatics, computational linguistics, and information retrieval, and for researchers entering these fields.

Practical Text Mining and Statistical Analysis for Non-structured Text Data Applications

Practical Text Mining and Statistical Analysis for Non-structured Text Data Applications
Author: Gary Miner
Publisher: Academic Press
Total Pages: 1096
Release: 2012-01-11
Genre: Computers
ISBN: 012386979X

"The world contains an unimaginably vast amount of digital information which is getting ever vaster ever more rapidly. This makes it possible to do many things that previously could not be done: spot business trends, prevent diseases, combat crime and so on. Managed well, the textual data can be used to unlock new sources of economic value, provide fresh insights into science and hold governments to account. As the Internet expands and our natural capacity to process the unstructured text that it contains diminishes, the value of text mining for information retrieval and search will increase dramatically. This comprehensive professional reference brings together all the information, tools and methods a professional will need to efficiently use text mining applications and statistical analysis. The Handbook of Practical Text Mining and Statistical Analysis for Non-structured Text Data Applications presents a comprehensive how- to reference that shows the user how to conduct text mining and statistically analyze results. In addition to providing an in-depth examination of core text mining and link detection tools, methods and operations, the book examines advanced preprocessing techniques, knowledge representation considerations, and visualization approaches. Finally, the book explores current real-world, mission-critical applications of text mining and link detection using real world example tutorials in such varied fields as corporate, finance, business intelligence, genomics research, and counterterrorism activities"--

Clinical Data-Mining

Clinical Data-Mining
Author: Irwin Epstein
Publisher: Oxford University Press
Total Pages: 241
Release: 2010
Genre: Computers
ISBN: 019533552X

Clinical Data-Mining (CDM) involves the conceptualization, extraction, analysis, and interpretation of available clinical data for practice knowledge-building, clinical decision-making and practitioner reflection. Depending upon the type of data mined, CDM can be qualitative or quantitative; it is generally retrospective, but may be meaningfully combined with original data collection.Any research method that relies on the contents of case records or information systems data inevitably has limitations, but with proper safeguards these can be minimized. Among CDM's strengths however, are that it is unobtrusive, inexpensive, presents little risk to research subjects, and is ethically compatible with practitioner value commitments. When conducted by practitioners, CDM yields conceptual as well as data-driven insight into their own practice- and program-generated questions.This pocket guide, from a seasoned practice-based researcher, covers all the basics of conducting practitioner-initiated CDM studies or CDM doctoral dissertations, drawing extensively on published CDM studies and completed CDM dissertations from multiple social work settings in the United States, Australia, Israel, Hong Kong and the United Kingdom. In addition, it describes consulting principles for researchers interested in forging collaborative university-agency CDM partnerships, making it a practical tool for novice practitioner-researchers and veteran academic-researchers alike.As such, this book is an exceptional guide both for professionals conducting practice-based research as well as for social work faculty seeking an evidence-informed approach to practice-research integration.

Text Mining of Web-Based Medical Content

Text Mining of Web-Based Medical Content
Author: Amy Neustein
Publisher: Walter de Gruyter GmbH & Co KG
Total Pages: 286
Release: 2014-10-09
Genre: Computers
ISBN: 1614513902

• Includes Text Mining and Natural Language Processing Methods for extracting information from electronic health records and biomedical literature. • Analyzes text analytic tools for new media such as online forums, social media posts, tweets and video sharing. • Demonstrates how to use speech and audio technologies for improving access to online content for the visually impaired. Text Mining of Web-Based Medical Content examines various approaches to deriving high quality information from online biomedical literature, electronic health records, query search terms, social media posts and tweets. Using some of the latest empirical methods of knowledge extraction, the authors show how online content, generated by both professionals and laypersons, can be mined for valuable information about disease processes, adverse drug reactions not captured during clinical trials, and tropical fever outbreaks. Additionally, the authors show how to perform infromation extraction on a hospital intranet, how to build a social media search engine to glean information about patients' own experiences interacting with healthcare professionals, and how to improve access to online health information. This volume provides a wealth of timely material for health informatic professionals and machine learning, data mining, and natural language researchers. Topics in this book include: • Mining Biomedical Literature and Clinical Narratives • Medication Information Extraction • Machine Learning Techniques for Mining Medical Search Queries • Detecting the Level of Personal Health Information Revealed in Social Media • Curating Layperson’s Personal Experiences with Health Care from Social Media and Twitter • Health Dialogue Systems for Improving Access to Online Content • Crowd-based Audio Clips to Improve Online Video Access for the Visually Impaired • Semantic-based Visual Information Retrieval for Mining Radiographic Image Data • Evaluating the Importance of Medical Terminology in YouTube Video Titles and Descriptions

Data Science for Healthcare

Data Science for Healthcare
Author: Sergio Consoli
Publisher: Springer
Total Pages: 367
Release: 2019-02-23
Genre: Computers
ISBN: 3030052494

This book seeks to promote the exploitation of data science in healthcare systems. The focus is on advancing the automated analytical methods used to extract new knowledge from data for healthcare applications. To do so, the book draws on several interrelated disciplines, including machine learning, big data analytics, statistics, pattern recognition, computer vision, and Semantic Web technologies, and focuses on their direct application to healthcare. Building on three tutorial-like chapters on data science in healthcare, the following eleven chapters highlight success stories on the application of data science in healthcare, where data science and artificial intelligence technologies have proven to be very promising. This book is primarily intended for data scientists involved in the healthcare or medical sector. By reading this book, they will gain essential insights into the modern data science technologies needed to advance innovation for both healthcare businesses and patients. A basic grasp of data science is recommended in order to fully benefit from this book.

Biomedical Natural Language Processing

Biomedical Natural Language Processing
Author: Kevin Bretonnel Cohen
Publisher: John Benjamins Publishing Company
Total Pages: 174
Release: 2014-02-15
Genre: Computers
ISBN: 9027271062

Biomedical Natural Language Processing is a comprehensive tour through the classic and current work in the field. It discusses all subjects from both a rule-based and a machine learning approach, and also describes each subject from the perspective of both biological science and clinical medicine. The intended audience is readers who already have a background in natural language processing, but a clear introduction makes it accessible to readers from the fields of bioinformatics and computational biology, as well. The book is suitable as a reference, as well as a text for advanced courses in biomedical natural language processing and text mining.

Artificial Intelligence in Healthcare

Artificial Intelligence in Healthcare
Author: Adam Bohr
Publisher: Academic Press
Total Pages: 385
Release: 2020-06-21
Genre: Computers
ISBN: 0128184396

Artificial Intelligence (AI) in Healthcare is more than a comprehensive introduction to artificial intelligence as a tool in the generation and analysis of healthcare data. The book is split into two sections where the first section describes the current healthcare challenges and the rise of AI in this arena. The ten following chapters are written by specialists in each area, covering the whole healthcare ecosystem. First, the AI applications in drug design and drug development are presented followed by its applications in the field of cancer diagnostics, treatment and medical imaging. Subsequently, the application of AI in medical devices and surgery are covered as well as remote patient monitoring. Finally, the book dives into the topics of security, privacy, information sharing, health insurances and legal aspects of AI in healthcare. - Highlights different data techniques in healthcare data analysis, including machine learning and data mining - Illustrates different applications and challenges across the design, implementation and management of intelligent systems and healthcare data networks - Includes applications and case studies across all areas of AI in healthcare data

Natural Language Processing and Text Mining

Natural Language Processing and Text Mining
Author: Anne Kao
Publisher: Springer Science & Business Media
Total Pages: 272
Release: 2007-03-06
Genre: Computers
ISBN: 1846287545

Natural Language Processing and Text Mining not only discusses applications of Natural Language Processing techniques to certain Text Mining tasks, but also the converse, the use of Text Mining to assist NLP. It assembles a diverse views from internationally recognized researchers and emphasizes caveats in the attempt to apply Natural Language Processing to text mining. This state-of-the-art survey is a must-have for advanced students, professionals, and researchers.

Supervised Machine Learning for Text Analysis in R

Supervised Machine Learning for Text Analysis in R
Author: Emil Hvitfeldt
Publisher: CRC Press
Total Pages: 402
Release: 2021-10-22
Genre: Computers
ISBN: 1000461971

Text data is important for many domains, from healthcare to marketing to the digital humanities, but specialized approaches are necessary to create features for machine learning from language. Supervised Machine Learning for Text Analysis in R explains how to preprocess text data for modeling, train models, and evaluate model performance using tools from the tidyverse and tidymodels ecosystem. Models like these can be used to make predictions for new observations, to understand what natural language features or characteristics contribute to differences in the output, and more. If you are already familiar with the basics of predictive modeling, use the comprehensive, detailed examples in this book to extend your skills to the domain of natural language processing. This book provides practical guidance and directly applicable knowledge for data scientists and analysts who want to integrate unstructured text data into their modeling pipelines. Learn how to use text data for both regression and classification tasks, and how to apply more straightforward algorithms like regularized regression or support vector machines as well as deep learning approaches. Natural language must be dramatically transformed to be ready for computation, so we explore typical text preprocessing and feature engineering steps like tokenization and word embeddings from the ground up. These steps influence model results in ways we can measure, both in terms of model metrics and other tangible consequences such as how fair or appropriate model results are.

Text Analytics with Python

Text Analytics with Python
Author: Dipanjan Sarkar
Publisher: Apress
Total Pages: 397
Release: 2016-11-30
Genre: Computers
ISBN: 1484223888

Derive useful insights from your data using Python. You will learn both basic and advanced concepts, including text and language syntax, structure, and semantics. You will focus on algorithms and techniques, such as text classification, clustering, topic modeling, and text summarization. Text Analytics with Python teaches you the techniques related to natural language processing and text analytics, and you will gain the skills to know which technique is best suited to solve a particular problem. You will look at each technique and algorithm with both a bird's eye view to understand how it can be used as well as with a microscopic view to understand the mathematical concepts and to implement them to solve your own problems. What You Will Learn: Understand the major concepts and techniques of natural language processing (NLP) and text analytics, including syntax and structure Build a text classification system to categorize news articles, analyze app or game reviews using topic modeling and text summarization, and cluster popular movie synopses and analyze the sentiment of movie reviews Implement Python and popular open source libraries in NLP and text analytics, such as the natural language toolkit (nltk), gensim, scikit-learn, spaCy and Pattern Who This Book Is For : IT professionals, analysts, developers, linguistic experts, data scientists, and anyone with a keen interest in linguistics, analytics, and generating insights from textual data