Circulating Nucleic Acids in Early Diagnosis, Prognosis and Treatment Monitoring

Circulating Nucleic Acids in Early Diagnosis, Prognosis and Treatment Monitoring
Author: Peter B. Gahan
Publisher: Springer
Total Pages: 476
Release: 2014-11-18
Genre: Medical
ISBN: 9401791686

DNA and RNA fractions can be isolated from a variety of body fluids including whole blood, serum, plasma, urine, saliva and cerebrospinal fluid from both patients and healthy individuals. Such isolates can be exploited in the early detection of clinical disorders, stratification of patients for treatment, treatment monitoring and clinical follow-up. In addition, the use in fetal medicine allows the early detection of fetal sex, Rh factor and aneuploid disorders as well as following both fetal and premature born infant development. This volume is intended as a primer for those who are interested in entering the field of circulating nucleic acids. The areas covered in this volume include: · Background and general biology of circulating nucleic acids · Methodology · Applications of circulating nucleic acids · Quality Assurance · Ethics

Circulating Nucleic Acids in Plasma and Serum IV

Circulating Nucleic Acids in Plasma and Serum IV
Author: R. Swaminathan
Publisher: Wiley-Blackwell
Total Pages: 372
Release: 2006-10-09
Genre: Science
ISBN: 9781573316279

An accurate, inexpensive, and noninvasive method for the early diagnosis of cancer has been something of a holy grail among cancer researchers, but until recently a method meeting all three criteria has been elusive. Nucleic acids were first discovered in circulation in 1948, but it was not until the 1960s and 70s that patients with autoimmune disease and cancer were discovered to have higher levels of circulating DNA than were detected in in healthy persons. The focus in this volume is on three major applications of the circulating nucleic acids detection method: cancer, fetal medicine, and diseases such as diabetes, stroke, and myocardial infarction. In addition, there are reports on the biology and origins of circulating DNA and RNA and on improved methods for the detection of nucleic acids in plasma and serum. The circulating DNA found in cancer patients has many characteristics in common with their tumors, which made it an attractive candidate for use in the diagnosis and management of patients with malignancies. This method can also be applied to the assessment of the sublinical tumor burden in cancer patients, thus reducing the risk of unnecessary chemotherapy. Detection of nucleic acids circulating in maternal serum means that fetal diagnosis may be possible without resorting to the more dangerous and invasive methods now used (e.g., amniotic fluid and chorionic villus sampling). Detection of problems in the pregnancy such as preeclampsia and intrauterine growth retardation may also become possible through maternal blood samples. In diabetic patients, circulating nucleic acids can be used for the early detection of developments such as retinopathy. The benefits of using circulating nucleic acids in the diagnosis and management of cancer and chronic disease will be realized through earlier detection by means of this less expensive and less invasive testing technique and through its potential for closer monitoring of the disease. NOTE: Annals volumes are available for sale as individual books or as a journal. For information on institutional journal subscriptions, please visit www.blackwellpublishing.com/nyas. ACADEMY MEMBERS: Please contact the New York Academy of Sciences directly to place your order (www.nyas.org). Members of the New York Academy of Science receive full-text access to the Annals online and discounts on print volumes. Please visit http://www.nyas.org/MemberCenter/Join.aspx for more information about becoming a member

Circulating Nucleic Acids in Plasma and Serum

Circulating Nucleic Acids in Plasma and Serum
Author: Peter B. Gahan
Publisher: Springer Science & Business Media
Total Pages: 279
Release: 2010-10-08
Genre: Medical
ISBN: 9048193826

DNA and RNA fractions have been isolated from the whole blood, serum, plasma, the surface of blood cells, urine, saliva and spinal fluid from both healthy individuals and clinical patients. Recent developments are presented concerning the isolation, quantification and analysis of these molecules and their use in the identification of specific nucleic acid fragments related to a variety of clinical disorders thereby permitting their early diagnosis and prognosis.

Circulating Molecular Biomarkers: Next-Generation Tools for Monitoring Minimal Residual Disease in Cancer Patients

Circulating Molecular Biomarkers: Next-Generation Tools for Monitoring Minimal Residual Disease in Cancer Patients
Author: Zohreh Amoozgar
Publisher: Frontiers Media SA
Total Pages: 137
Release: 2023-08-16
Genre: Medical
ISBN: 283253192X

Traditional cancer diagnosis relies on tissue biopsy, blood testing as well as medical imaging. By the detection moment, in most cases the tumor size may reach several millimeters and the risk of distant metastasis is unavoidable. Even, following drug treatment, there is no accurate and timely way to follow up the success of treatment. New reliable tumor-specific biomarkers/tools that allow non-invasive early cancer detection as well as monitoring of anti-cancer therapeutic regime is highly demanded. To tackle limitations of traditional cancer management, liquid biopsy has emerged which screen bodily fluids using ultrasensitive biosensing systems capable of simultaneous capturing and studying horizontal gene transfer (HGT) materials including circulating tumor cells (CTCs), exosomes, cell-free DNA, and apoptotic bodies. These are messengers and/or delivery systems by which tumor cells are communicating as well as transforming/sharing new phenotypes with each other resulting in drug resistance, distant metastatic outbreaks, and cancer recurrence. Acting as next-generation prognostic and therapeutic tools call for understanding the molecular mechanisms by which HGT works to tran

Circulating Nucleic Acids in Serum and Plasma – CNAPS IX

Circulating Nucleic Acids in Serum and Plasma – CNAPS IX
Author: Peter B. Gahan
Publisher: Springer
Total Pages: 215
Release: 2016-10-17
Genre: Medical
ISBN: 3319420445

The book will present the progress made since the last meeting in fall 2013 concerning the analysis of circulating extra-cellular nucleic acids. There are a modest number of laboratories involved in this field, nevertheless the number of papers published by researchers is extensive. The articles which will be published in this meeting report will be a valuable contribution for researchers and research students alike and will help them to stay on top of the developments in different research areas and to „cross borders“ between them.

Nucleic Acids as Molecular Diagnostics

Nucleic Acids as Molecular Diagnostics
Author: Andreas Keller
Publisher: John Wiley & Sons
Total Pages: 390
Release: 2014-09-10
Genre: Science
ISBN: 3527672222

By integrating technology, supporting infrastructure and efficient application, the all-in-one guide presents molecular diagnostics as an essential component of modern, personalized clinical practice. It considers all important aspects, from the hardware and software needed, to recent improvements in blood- and non-blood-based biomarker tests. Chapters on ethical challenges and a look at current trends and the latest innovations are also included. Bridging the gap between industry and academia, this is a highly useful resource for practitioners as well as for developers of modern, DNA- and RNA-based molecular diagnostics.

Circulating Tumor Cells

Circulating Tumor Cells
Author: Richard J. Cote
Publisher: Springer Nature
Total Pages: 672
Release: 2023-08-01
Genre: Medical
ISBN: 3031229037

It is well recognized that blood could be the optimal site for evaluating cancer, allowing easy and repeated access for determining prognosis, establishing molecular targets, evaluating the efficacy of therapy, detecting the earliest signs of recurrence, and even detecting cancer at its earliest and most curable stages. The analysis of cancer through blood samples is now known as the liquid biopsy and has been a rich source of research and clinical application. There has been an explosion of interest and progress in liquid biopsy technologies since the first edition of this book. The second edition will expand its focus to now include not only circulating tumor cells (CTC), but also other emerging aspects of the liquid biopsy, including circulating tumor DNA and methylated DNA (ctDNA, ct meDNA), ctRNA, ct miRNA, circulating tumor proteins (and other) biomarkers and circulating tumor derived exosomes (ctExosomes). CTC play a central role in tumor dissemination and metastasis, and have been established as an important evaluative and research tool in advanced cancer, and potentially important in early stage disease. CTC defines tumor cells circulating in blood, while Disseminated Tumor Cells (DTC) refers to tumor cells identified in bone marrow. CTC/DTC are extremely rare events, even in late stage cancer, and their detection has presented enormous technical challenges, with the emergence of multiple technologies developed to address these challenges, including enrichment, identification and sophisticated analytical techniques to evaluate CTC and other cells in circulation that may also be important in the biology of metastasis. As foundational as CTC/DTC has been, the field of liquid biopsy has expanded well beyond these analytes. The relevance of circulating nucleic acids derived from tumor cells has quickly progressed from research to the clinic. There are now well established clinical applications for using ctDNA/RNA to determine therapeutic targets, follow disease progression and detect cancer recurrence long before routine clinical methods. One of the most exciting new areas of work is the possibility of using these circulating tumor derived nucleic acids to detect cancer at its earliest and potentially most curable stages. Another new and burgeoning area is the detection and analysis of ctExosomes. These highly abundant particles which are actively secreted from tumor (and indeed all) cells represent a novel way to detect and define multiple analytes of importance, including proteins, DNA and meDNA, RNA, miRNA, and other cell components that are protected and preserved in these compact structures. This second edition of Circulating Tumor Cells: Advances in Liquid Biopsy Technologies is entirely new and brings together leaders and innovators in the field of liquid biopsy, including basic and molecular biologists, chemists, engineers, statisticians, experts in tumor banking, test developers, research administrators and clinicians. A special feature of this book is that it includes chapters from the members of the US National Cancer Institute Liquid Biopsy Consortium. This edition also includes many of the participants of the latest international meeting on the Advances in Circulating Tumor Cells (ACTC) which is held in Greece every two years and gathers the most important liquid biopsy investigators from around the world. Thus, this edition represents the most comprehensive and up-to-date resource for those who want to further explore the exciting field of CTC and other liquid biopsy technologies. The new edition will be useful to a wide audience including scientists studying metastasis, cancer researchers, translational scientists, oncologic surgeons, medical oncologists, members of the biopharmaceutical industry, and graduate and undergraduate students studying cancer biology.

Investigating the Use of Circulating Tumor DNA for Cancer Surveillance and Early Detection in (pediatric) Sarcomas and Li-Fraumeni Syndrome

Investigating the Use of Circulating Tumor DNA for Cancer Surveillance and Early Detection in (pediatric) Sarcomas and Li-Fraumeni Syndrome
Author: Sangeetha Paramathas
Publisher:
Total Pages: 0
Release: 2020
Genre:
ISBN:

Circulating tumor DNA (ctDNA) is a biomarker that has been shown to be valuable in a variety of contexts in clinical oncology such as determining prognosis, monitoring treatment and predicting recurrence. Early detection using ctDNA may be invaluable for patients with a genetic risk to develop cancers. Li-Fraumeni Syndrome (LFS) is a cancer predisposition syndrome caused by inherited mutations in the tumor suppressor gene, TP53. LFS is characterized by early onset of a wide spectrum of tumors and an 83-fold lifetime risk of multiple cancers. The 'Toronto Protocol' is a multi-modality clinical surveillance protocol that was developed to facilitate early cancer detection in this population. The protocol utilizes a combination of MRI scans, ultrasounds, biochemical tests, and physical examinations. Though it has been shown to be effective in reducing tumor related mortality and treatment related morbidity, reduced sensitivity and specificity make clinical surveillance challenging to implement. To address these challenges, we are using a combination of xenograft and spontaneous tumor forming animal models to study the dynamics of ctDNA in relation to tumor burden and to resolve the feasibility of capturing the development of tumors at their earliest stages. Our work using a rhabdomyosarcoma xenograft model demonstrated that there is a strong relationship between tumor burden and ctDNA concentration in the blood. Furthermore, we detected ctDNA during the development of small, early lesions using simulated metastasis models. In a follow-up study, we used a Trp53R172H/+ pre-clinical model of LFS to assess the use of ctDNA as a surveillance tool for early detection of spontaneously developing tumors. We were able to identify ctDNA in blood samples collected before and at the onset of tumor formation as confirmed by radiological imaging and subsequently used ctDNA to monitor cancer progression. Our studies provide the first evidence demonstrating the capacity of circulating tumor DNA for early cancer detection in pediatric sarcomas, specifically arising from a hereditary cancer predisposition syndrome. Given the spontaneous nature of tumor formation in LFS, the benefits of early cancer detection and subsequent diagnosis are unparalleled in this patient population by accelerating introduction of early treatment intervention and improving disease prognosis. This work illustrates the capacity for ctDNA detection to complement and enhance cancer surveillance protocols in LFS patients. Furthermore, the outcomes of this study will support the validation and implementation of ctDNA analysis for cancer surveillance in the clinic.

Precision Medicine in Oncology

Precision Medicine in Oncology
Author: Bulent Aydogan
Publisher: John Wiley & Sons
Total Pages: 288
Release: 2020-11-02
Genre: Medical
ISBN: 1119432448

A FRESH EXAMINATION OF PRECISION MEDICINE'S INCREASINGLY PROMINENT ROLE IN THE FIELD OF ONCOLOGY Precision medicine takes into account each patient's specific characteristics and requirements to arrive at treatment plans that are optimized towards the best possible outcome. As the field of oncology continues to advance, this tailored approach is becoming more and more prevalent, channelling data on genomics, proteomics, metabolomics and other areas into new and innovative methods of practice. Precision Medicine in Oncology draws together the essential research driving the field forward, providing oncology clinicians and trainees alike with an illuminating overview of the technology and thinking behind the breakthroughs currently being made. Topics covered include: Biologically-guided radiation therapy Informatics for precision medicine Molecular imaging Biomarkers for treatment assessment Big data Nanoplatforms Casting a spotlight on this emerging knowledge base and its impact upon the management of tumors, Precision Medicine in Oncology opens up new possibilities and ways of working – not only for oncologists, but also for molecular biologists, radiologists, medical geneticists, and others.

Circulating Nucleic Acids in Plasma/serum III and Serum Proteomics

Circulating Nucleic Acids in Plasma/serum III and Serum Proteomics
Author: Dave S. B. Hoon
Publisher:
Total Pages: 352
Release: 2004
Genre: Medical
ISBN:

Numerous questions remain regarding the origin, release, clearance, clinical utility, and possible functionality of circulating nucleic acids. Serum proteomics is introduced as a new topic to CNAPS and is expected to provide yet another platform for breakthrough discoveries. Serum proteomics topics will address both cancer and early pregnancy.