Bacterial Artificial Chromosomes

Bacterial Artificial Chromosomes
Author: Shaying Zhao
Publisher: Springer Science & Business Media
Total Pages: 333
Release: 2008-02-03
Genre: Science
ISBN: 159259753X

Several developmental and historical threads are woven and displayed in these two volumes of Bacterial Artificial Chromosomes, the first on Library Construction, Physical Mapping, and Sequencing, and the second on Fu- tional Studies. The use of large-insert clone libraries is the unifying feature, with many diverse contributions. The editors have had quite distinct roles. Shaying Zhao has managed several BAC end-sequencing projects. Marvin Stodolsky during 1970–1980 contributed to the elucidation of the natural b- teriophage/prophage P1 vector system. Later, he became a member of the Genome Task Group of the Department of Energy (DOE), through which s- port flowed for most clone library resources of the Human Genome Program (HGP). Some important historical contributions are not represented in this volume. This preface in part serves to mention these contributions and also briefly surveys historical developments. Leon Rosner (deceased) contributed substantially in developing a PAC library for drosophila that utilized a PI virion-based encapsidation and tra- fection process. This library served prominently in the Drosophila Genome Project collaboration. PACs proved easy to purify so that they substantially replaced the YACs used earlier. Much of the early automation for massive clone picking and processing was developed at the collaborating Lawrence Berkeley National Laboratory. However, the P1 virion encapsidation system itself was too fastidious, and P1 virion-based methods did not gain popularity in other genome projects.

Bacterial Artificial Chromosomes

Bacterial Artificial Chromosomes
Author: Pradeep Chatterjee
Publisher: BoD – Books on Demand
Total Pages: 152
Release: 2011-11-25
Genre: Science
ISBN: 9533077255

This book focuses on the numerous applications of Bacterial Artificial Chromosomes (BACs) in a variety of studies. The topics reviewed range from using BAC libraries as resources for marsupial and monotreme gene mapping and comparative genomic studies, to using BACs as vehicles for maintaining the large infectious DNA genomes of viruses. The large size of the insert DNA in BACs and the ease of engineering mutations in that DNA within the bacterial host, allowed manipulating the BAC-viral DNA of Varicella-Zoster Virus. Other reviews include the maintenance and suitable expression of foreign genes from a Baculovirus genome, including protein complexes, from the BAC-viral DNA and generating vaccines from BAC-viral DNA genomes of Marek's disease virus. Production of multi-purpose BAC clones in the novel Bacillus subtilis host is described, along with chapters that illustrate the use of BAC transgenic animals to address important issues of gene regulation in vertebrates, such as functionally identifying novel cis-acting distal gene regulatory sequences.

Bacterial Artificial Chromosomes

Bacterial Artificial Chromosomes
Author: Shaying Zhao
Publisher: Springer Science & Business Media
Total Pages: 367
Release: 2008-02-03
Genre: Science
ISBN: 1592597521

For both volumes: Expert investigators describe not only the classic methods, but also the many novel techniques they have perfected for the transfer of large DNAs into the cells of both microbes and animals via large-insert recombinant DNAs. Volume 1 presents readily reproducible techniques for library construction, physical mapping, and sequencing.. An accompanying volume, Volume 2: Functional Studies, provides a wide variety of methods and applications for functional analysis of the DNA-transformed organisms. Besides protocols, each chapter includes scientific reviews, software tools, database resources, genome sequencing strategies, and illustrative case studies.

Bacterial Artificial Chromosomes

Bacterial Artificial Chromosomes
Author: Pradeep Chatterjee
Publisher:
Total Pages: 150
Release: 2011
Genre:
ISBN: 9789535151753

This book focuses on the numerous applications of Bacterial Artificial Chromosomes (BACs) in a variety of studies. The topics reviewed range from using BAC libraries as resources for marsupial and monotreme gene mapping and comparative genomic studies, to using BACs as vehicles for maintaining the large infectious DNA genomes of viruses. The large size of the insert DNA in BACs and the ease of engineering mutations in that DNA within the bacterial host, allowed manipulating the BAC-viral DNA of Varicella-Zoster Virus. Other reviews include the maintenance and suitable expression of foreign genes from a Baculovirus genome, including protein complexes, from the BAC-viral DNA and generating vaccines from BAC-viral DNA genomes of Marek's disease virus. Production of multi-purpose BAC clones in the novel Bacillus subtilis host is described, along with chapters that illustrate the use of BAC transgenic animals to address important issues of gene regulation in vertebrates, such as functionally identifying novel cis-acting distal gene regulatory sequences.

Mammalian Artificial Chromosomes

Mammalian Artificial Chromosomes
Author: Vittorio Sgaramella
Publisher: Springer Science & Business Media
Total Pages: 277
Release: 2008-02-02
Genre: Medical
ISBN: 1592594344

In 1996, we organized a workshop, inter alia, at the National Research Co- cil in Milan under the generous sponsorship of the European Science Foun- tion. On that occasion, a small group of investigators convened from many countries and presented early evidence of the possibility of assembling basic units of mammalian chromosomes into artificial constructs (or, indeed, red- ing the relevant components to more manageable dimensions and defined c- stitution). Progress in the following years has been slow but steady. Many scientists who took part in the workshop have since been engaged in active and prod- tive research. It goes to the credit of Humana Press to have realized the need for a book on artificial chromosomes that aims to provide better tools to all scientists committed to this field who are confronted with very difficult tech- cal problems. We have strived to cover in Mammalian Artificial Chromosomes: Methods and Protocols all relevant areas of artificial chromosome research, from basic genetics to daring attempts to build new tools for genetic therapy. We are of course grateful to the authors who have accepted the task of describing the technical steps and pitfalls that can be encountered in their research. Rarely has a very delicate methodology been presented with such meticulous care. We have been helped in this enterprise by the excellent librarian of the LITA Institute in Segrate, Italy, Ms. Claudia Piergigli, whom we thank warmly. Ms.

Bacterial Chromosomes—Advances in Research and Application: 2012 Edition

Bacterial Chromosomes—Advances in Research and Application: 2012 Edition
Author:
Publisher: ScholarlyEditions
Total Pages: 23
Release: 2012-12-26
Genre: Science
ISBN: 1481632973

Bacterial Chromosomes—Advances in Research and Application: 2012 Edition is a ScholarlyPaper™ that delivers timely, authoritative, and intensively focused information about Bacterial Chromosomes in a compact format. The editors have built Bacterial Chromosomes—Advances in Research and Application: 2012 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Bacterial Chromosomes in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Bacterial Chromosomes—Advances in Research and Application: 2012 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.

Human Bacterial Artificial Chromosome (BAC) Clones

Human Bacterial Artificial Chromosome (BAC) Clones
Author:
Publisher:
Total Pages:
Release:
Genre:
ISBN:

Offers access to tools to search the the Institute for Genomic Research (TIGR) Bacterial Artificial Chromosome (BAC) Database, based in Rockville, Maryland. Explains the significance of sequences from human bacterial artificial chromosome (BAC) clones.

Development of an Akata-based Bacterial Artificial Chromosome

Development of an Akata-based Bacterial Artificial Chromosome
Author: Lavon Paongo Tonga
Publisher:
Total Pages: 104
Release: 2006
Genre: Artificial chromosomes
ISBN: 9781109829891

Genetic mutagenesis of individual genes in context of the complete Epstein-Barr virus genome is essential to understanding function of proteins. Past strategies for deriving a mutant within EBV have been to disrupt a gene with a cassette encoding for antibiotic resistance flanked with sequence surrounding the targeted gene. The cassette is transfected into virus-carrying cells and positive selection is applied to select for a genome in which homologous recombination with flanking sequence has occurred. Although this method has met with success, it has limitations. It is time consuming, since a successful insertion of the cassette relies on a rare recombination event in the eukaryotic cell, and it allows only a narrow range of mutations to be made. Several herpesviruses have been cloned as bacterial artificial chromosomes (BAC) where a mini-F' plasmid is cloned into the viral genome so that it can be propagated in both eukaryotic and prokaryotic cells. Standard bacterial genetics can then be applied to the whole viral genome in prokaryotic cells prior to transferring it into eukaryotic cells for production of mutant progeny.

Echinoderms Part B

Echinoderms Part B
Author:
Publisher: Academic Press
Total Pages: 552
Release: 2019-04-02
Genre: Science
ISBN: 0128170735

Echinoderms, Volume 151, the latest release in the Methods in Cell Biology series, highlights advances in the field, with this update presenting chapters on Echinoderm Genome Databases, analysis of gene regulatory networks, using ATAC-seq and RNA-seq to increase resolution in GRN connectivity, multiplex cis-regulatory analysis, experimental approaches GRN/signal pathways, BACs, analysis of chromatin accessibility using ATAC-seq, analysis of sea urchin proteins /Click IT, CRISPR/Cas9-mediated genome editing in sea urchins, super-resolution and in toto imaging of echinoderm embryos, and methods for analysis of intracellular ion signals in sperm, eggs and embryos. Presents clear, concise protocols provided by experts who have established the echinoderms as a model systems Highlights new advances in the field, with this update presenting interesting chapters on echinoderms