Advancing Methods for Biomolecular Crystallography

Advancing Methods for Biomolecular Crystallography
Author: Randy Read
Publisher: Springer
Total Pages: 360
Release: 2013-04-03
Genre: Science
ISBN: 9400762321

This work presents a snapshot of the state of the art of modern biomolecular crystallography, from crystallisation through structure determination and even interactive presentation on the web. Methods driving the latest automated structure determination pipelines are explained, as well as how to deal with problems such as crystal pathologies that still demand expert analysis. These methods are illustrated through their application to problems of great biological interest, such as the molecular machinery underlying the complement pathway, the mechanism of action of monoamine oxidase inhibitors, and the structure of the eukaryotic ribosome. Complementary approaches, such as neutron diffraction, small angle X-ray scattering, coherent diffraction and computational modelling, are also explored.

Biomolecular Crystallography

Biomolecular Crystallography
Author: Bernhard Rupp
Publisher: Garland Science
Total Pages: 832
Release: 2009-10-20
Genre: Science
ISBN: 1134064195

Synthesizing over thirty years of advances into a comprehensive textbook, Biomolecular Crystallography describes the fundamentals, practices, and applications of protein crystallography. Illustrated in full-color by the author, the text describes mathematical and physical concepts in accessible and accurate language. Biomolecular Crystallography will be a valuable resource for advanced undergraduate and graduate students and practitioners in structural biology, crystallography, and structural bioinformatics.

Advanced Spectroscopic Methods to Study Biomolecular Structure and Dynamics

Advanced Spectroscopic Methods to Study Biomolecular Structure and Dynamics
Author: Prakash Saudagar
Publisher: Elsevier
Total Pages: 560
Release: 2022-09-28
Genre: Science
ISBN: 0323993664

Advanced Spectroscopic Methods to Study Biomolecular Structure and Dynamics presents the latest emerging technologies in spectroscopy and advances in established spectroscopic methods. The book presents a guide to research methods in biomolecular spectroscopy, providing comprehensive coverage of developments in the spectroscopic techniques used to study protein structure and dynamics. Seventeen chapters from leading researchers cover key aspects of spectroscopic methods, with each chapter covering structure, folding, and dynamics. This title will help researchers keep up-to-date on the latest novel methods and advances in established methods. - Presents current, emerging, and evolving advances and applications of spectroscopic techniques in the study of biomolecules, including proteins and nucleic acids - Discusses contemporary spectroscopic techniques used to study biomolecular structure, interaction, and dynamics

Advanced Methods in Structural Biology

Advanced Methods in Structural Biology
Author: Ângela Sousa
Publisher: Springer Nature
Total Pages: 462
Release: 2023-04-24
Genre: Science
ISBN: 1071631470

This volume explores the latest integrated bioprocesses and technologies used to study the production of the target recombinant protein of therapeutic or diagnostic interest; its isolation, purification, and stabilization; and the bio-interaction and structural analyses. The chapters in this book are organized into four parts. Part One covers production methods of soluble and membrane proteins in prokaryotic and eukaryotic expression systems, such as Lactococcus lactis and Escherichia coli. Part Two describes traditional and novel approaches for recombinant protein purification and stabilization, and buffers and additives. Part Three discusses automated methods in structural biology based on in silico approaches; and Part Four provides examples of advanced protein investigation methodologies to assess structural analysis such as high-throughput protein crystallization and time-resolved serial crystallography. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, Advanced Methods in Structural Biology is a valuable resource to those in academia (i.e., graduate students and postdoctoral researchers) and researchers in the pharmaceutical industry who wish to learn more about this developing field. Chapter 5 is available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Advanced Fragmentation Methods in Biomolecular Mass Spectrometry

Advanced Fragmentation Methods in Biomolecular Mass Spectrometry
Author: Frederik Lermyte
Publisher: Royal Society of Chemistry
Total Pages: 359
Release: 2020-12-15
Genre: Science
ISBN: 1839161043

This book is a high-level introduction, as well as a reference work for experienced users, to ECD, ETD, EDD, NETD, UVPD, SID, and other advanced fragmentation methods.

RNA Structure and Folding

RNA Structure and Folding
Author: Dagmar Klostermeier
Publisher: Walter de Gruyter
Total Pages: 432
Release: 2013-10-14
Genre: Science
ISBN: 3110284952

While structure-function relationships of proteins have been studied for a long time, structural studies of RNA face additional challenges. Nevertheless, with the continuous discovery of novel RNA molecules with key cellular functions and of novel pathways and interaction networks, the need for structural information of RNA is still increasing. This volume provides an introduction into techniques to assess structure and folding of RNA. Each chapter explains the theoretical background of one technique, and illustrates possibilities and limitations in selected application examples.

Advances in Imaging and Electron Physics

Advances in Imaging and Electron Physics
Author:
Publisher: Academic Press
Total Pages: 280
Release: 2021-06-10
Genre: Technology & Engineering
ISBN: 032391506X

Advances in Imaging and Electron Physics, Volume 218 merges two long-running serials, Advances in Electronics and Electron Physics and Advances in Optical and Electron Microscopy. The series features articles on the physics of electron devices (especially semiconductor devices), particle optics at high and low energies, microlithography, image science, digital image processing, electromagnetic wave propagation, electron microscopy and the computing methods used in all these domains. Specific chapters in this release cover Phase retrieval methods applied to coherent imaging, X-ray phase-contrast imaging: a broad overview of some fundamentals, Graphene and borophene as nanoscopic materials for electronics – with review of the physics, and more. - Provides the authority and expertise of leading contributors from an international board of authors - Presents the latest release in the Advances in Imaging and Electron Physics series - Updated release includes the latest information on the Coulomb Interactions in Charged Particle Beams

Macromolecular Crystallography

Macromolecular Crystallography
Author: Maria Armenia Carrondo
Publisher: Springer
Total Pages: 213
Release: 2011-12-01
Genre: Science
ISBN: 9400725302

This volume is a collection of the contributions presented at the 42nd Erice Crystallographic Course whose main objective was to train the younger generation on advanced methods and techniques for examining structural and dynamic aspects of biological macromolecules. The papers review the techniques used to study protein assemblies and their dynamics, including X-ray diffraction and scattering, electron cryo-electron microscopy, electro nanospray mass spectrometry, NMR, protein docking and molecular dynamics. A key theme throughout the book is the dependence of modern structural science on multiple experimental and computational techniques, and it is the development of these techniques and their integration that will take us forward in the future.

Protein Crystallography

Protein Crystallography
Author: Alexander Wlodawer
Publisher: Humana Press
Total Pages: 672
Release: 2017-06-02
Genre: Science
ISBN: 9781493969982

This volume provides methods for modern macromolecular crystallography, including all steps leading to crystal structure determination and analysis. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Protein Crystallography aims to ensure successful results in the further study of this vital field.

Methods of Molecular Analysis in the Life Sciences

Methods of Molecular Analysis in the Life Sciences
Author: Andreas Hofmann
Publisher: Cambridge University Press
Total Pages: 229
Release: 2014-06-19
Genre: Business & Economics
ISBN: 1107044707

An accessible overview of the most popular and cutting-edge methods for studying the properties of molecules and their interactions.